DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP102A and Arhgap36

DIOPT Version :9

Sequence 1:NP_001245416.1 Gene:RhoGAP102A / 43781 FlyBaseID:FBgn0259216 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_229133.7 Gene:Arhgap36 / 302819 RGDID:1565967 Length:600 Species:Rattus norvegicus


Alignment Length:656 Identity:160/656 - (24%)
Similarity:248/656 - (37%) Gaps:170/656 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   589 KAIRTSSG------LLSSSSQFISNILHGHNNAGNQFNTLTDKLPDCNQSHATASMQKSKSLSNV 647
            ||.||...      ||.|:..|:..:|.|              .|..|...:...|....|||.:
  Rat     9 KAARTRCPRIMPLLLLLSAFIFLVCVLGG--------------APGQNPDRSRMDMVSIHSLSEL 59

  Fly   648 GQFVAKRMWRSRSKSQN-------KRSYLKSSIP----------TL-KWYPSEHFLWISESGESF 694
                      .|.|.|.       .|.:|....|          || ||:........:.|.::|
  Rat    60 ----------ERLKLQETAYHELVARHFLSEFKPDRVQPTDRPNTLQKWFQMLRGQDRAASLKTF 114

  Fly   695 QIVETNLTRLSKIESDIVKNFALEKIQELNIG-NIEDLKISPQKRR---CVPKKKSLTTSFFDNG 755
            .|         ::|..:|......|.:||... .:||:..|..:||   .|.:.......||...
  Rat   115 GI---------RLEEVLVNELTRRKQRELTDNMQVEDINGSTGRRRRGNVVQRMFGRMRRFFSRR 170

  Fly   756 KKDDQNPRSVLFGTSLECCLERDSKRNVTMEDRSKYSLLSMFRGSGSTPGSVLKLNDNVRSCESL 820
            :.:...||.          ..|..:|.....|                  ||.:|.:.....:.|
  Rat   171 RNEPTLPRE----------FTRRGRRGAISVD------------------SVAELENGALLLQIL 207

  Fly   821 PSKSLEYGSTELSAYVRGSFSNISKPLASLSQSENEDTELNFVKAYQEHSQLMVPIFVNNCIDYL 885
                              ..|.:|.|:............||.: |.|      :|..|..|..::
  Rat   208 ------------------QLSQLSLPIGQRLLGSKRKMSLNPI-AQQ------IPHIVETCCKFI 247

  Fly   886 EDNGLQQVGLFRVSTSKKRVKQLREEFDK--DIYFGISVDTCPHDVATLLKEFLRDLPEPLLCNT 948
            |.:||..||:|.:..|.:||.:|||.|||  ||....||:.  :|||.|||||.|::.:.||.:.
  Rat   248 EKHGLSSVGIFTIEYSLRRVIELRELFDKGMDIVLDDSVNV--NDVAELLKEFFREMKDSLLPDE 310

  Fly   949 LYLTFLKTQRIRNRRLQLEAISHLIRLLPIPHRDTLYVLLVFLAKVAAHSDDIWSTEGCCLTLGN 1013
            ||::||.|..::.:. |:.|:..|:.|:|..|.|||..||..|.||..:.:|....:| .|..||
  Rat   311 LYMSFLLTATLKPQD-QVSALQLLVYLMPPCHSDTLERLLKALHKVTENCEDSIGLDG-QLVPGN 373

  Fly  1014 KMDSYNLATVFAPNILRSTHLTFSRDKEQENMID----AINVVRTMINHYEEIFNISAELLNVIY 1074
            :|.|.|||.||..::|:...|.....::.:..||    ::||||.||::::.:|.:...:...:.
  Rat   374 RMTSTNLALVFGTSLLKKGKLAKRESRKTKLGIDHYVASVNVVRAMIDNWDILFQVPPHIQKQVA 438

  Fly  1075 TQALEACPEKLYELISTKVYGTEWTQQQIDDPQPGSLSDVLLEPPI------------------- 1120
            .:..::.||.| :.|..:      ..::|...:.....|.||..|:                   
  Rat   439 KRVWKSSPEAL-DFIRRR------NLRKIQSARIKMEEDALLSDPVDNSAEAQAAILAQSQPFDE 496

  Fly  1121 --HGKRYENINDFNNINFKRCQD-KRRDHSDPDKKK-------NNNENLEIITASLKISVAEQSH 1175
              .|....|..|..|.:|:...| :..||  ||..:       .|||:.:        |.|::..
  Rat   497 DPEGAPDVNFGDGMNYDFEDDSDFEDEDH--PDLAEVPYLDVIPNNEDTD--------SDADEMP 551

  Fly  1176 ISLKEP 1181
            .|.:||
  Rat   552 GSSEEP 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP102ANP_001245416.1 RhoGAP 874..1069 CDD:295372 75/200 (38%)
Arhgap36XP_229133.7 RhoGAP_ARHGAP6 228..433 CDD:239841 79/215 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340634
Domainoid 1 1.000 140 1.000 Domainoid score I4637
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46238
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12635
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.940

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