DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP102A and Arhgap11a

DIOPT Version :9

Sequence 1:NP_001245416.1 Gene:RhoGAP102A / 43781 FlyBaseID:FBgn0259216 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_852081.2 Gene:Arhgap11a / 228482 MGIID:2444300 Length:987 Species:Mus musculus


Alignment Length:465 Identity:115/465 - (24%)
Similarity:180/465 - (38%) Gaps:133/465 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   826 EYGSTELSAYVRGSFSNISKPLASLSQSENEDTELNFVKAYQEHSQLMVPIF-------VNNCID 883
            |..:||:...|.|      .|..||..|                   :||.|       |:.|..
Mouse    36 ETAATEIKGKVFG------VPFNSLPHS-------------------VVPEFGHIPSFLVDACAS 75

  Fly   884 YLEDNGLQQVGLFRVSTSKKRVKQLREEFDKDIYFGISVDTC-----PHDVATLLKEFLRDLPEP 943
            ..|.  :...||||.|.|..|:|.|:.:.|:.       :.|     |.|||.|||:|.|:||||
Mouse    76 LKEH--IHTEGLFRKSGSVVRLKALKSKLDQG-------EACLSSALPCDVAGLLKQFFRELPEP 131

  Fly   944 LLCNTLYLTFLKTQRI----RNRRLQLEAISHLIRLLPIPHRDTLYVLLVFLAKVAAHSDDIWST 1004
            :|...|:....|.|::    ||:...|     |..|:..|..|.|.....||..|:..:.:    
Mouse   132 VLPADLHEALFKAQQLGAEERNKATLL-----LSCLMANPTVDILRYFFNFLKSVSLRASE---- 187

  Fly  1005 EGCCLTLGNKMDSYNLATVFAPNILRST--HLTFSRDKEQENMIDAINVVRTMINHYEEIFNISA 1067
                    |||||.|||.:||||:|:::  |...|.:.|::..:.|. ||:|.|:...:|..:  
Mouse   188 --------NKMDSSNLAVIFAPNLLQTSEGHEKMSANTEKKLRLQAA-VVQTFIDCASDIGRV-- 241

  Fly  1068 ELLNVIYTQALEACPEKLYELISTKVYGTEWTQQQIDDPQPGSLSDVLLEPPIHG---------- 1122
                          |:.:.|.|                |....:..:...|.:.|          
Mouse   242 --------------PDFILEKI----------------PAMLGIDGLCTTPSLEGFEGDFETPGE 276

  Fly  1123 ---KRYENINDFNNINFKRCQDKRRDHSDP--DKKKNNNENLEIITASLKISV-AEQSHI---SL 1178
               ||.:::.||.|....:.:..|.....|  |:....:.:..|:|.|:|..: .|.||.   ..
Mouse   277 CKRKRRQSVGDFVNGALNKLKSSRTPSITPQQDRTAQASASPLILTPSVKRKLPGESSHAFSSKK 341

  Fly  1179 KEPIKEQ---EPITSYKQFSRSTLPTSISDVGVNTLRTDGAKLENKMKILTSNINKQDIPIKTTY 1240
            ::.||..   |.:.|: .||.::.|.|   |.::| ..||:...:...|..|..:.    :.|..
Mouse   342 RKSIKHNLNFELLPSH-FFSSNSTPVS---VHLDT-SPDGSSQTSLSPIAMSGNHL----VSTEL 397

  Fly  1241 KRQNLISSSR 1250
            :|...|:|.:
Mouse   398 RRSKRIASKK 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP102ANP_001245416.1 RhoGAP 874..1069 CDD:295372 67/212 (32%)
Arhgap11aNP_852081.2 RhoGAP-ARHGAP11A 46..246 CDD:239859 74/267 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..341 10/43 (23%)
SH3-RhoG_link 371..>464 CDD:293215 9/42 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 632..669
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 700..756
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 960..987
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2710
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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