DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP102A and rga-6

DIOPT Version :9

Sequence 1:NP_001245416.1 Gene:RhoGAP102A / 43781 FlyBaseID:FBgn0259216 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_491465.2 Gene:rga-6 / 172102 WormBaseID:WBGene00015303 Length:986 Species:Caenorhabditis elegans


Alignment Length:916 Identity:246/916 - (26%)
Similarity:380/916 - (41%) Gaps:184/916 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   421 PSKQDCSKSSHLIFRRSSLDEDI-----SQSVSDTIKRYLNMARKKSMQDSDSNRFKSINYDKNL 480
            ||....||:| :...||..|..|     |.:.|.:|.|.|    .:|...|:|.:..|::..|:.
 Worm    28 PSSSPKSKTS-VTSSRSDTDSVIPEHKPSSASSFSIGRLL----FRSSGSSNSTKRDSVDSGKDD 87

  Fly   481 RNIKAKGVLNPPGISAGLHKAVQTLNA---------------WPLIALDFIRGNESSLNLKNAHL 530
            ...::.....|...:.|..|:.|...:               |.|.......|::.| ::|...|
 Worm    88 ETGRSPATSRPGSPNPGGDKSPQMSTSRRLAGFASRSIRKSQWRLFKHRTFFGSQRS-SMKKNQL 151

  Fly   531 EWLRLEDERSHMQLERDKNPIELRSKVNP--------LQIASPANTSSYSKCTSAPTS------- 580
            :..||  ...|..::....|::|....|.        |||    ..|:..:.|.:.|:       
 Worm   152 QLPRL--TLRHPSIDSSAMPLQLDVDENASGEGSDDFLQI----RRSTQRRWTDSDTTGRLRDSR 210

  Fly   581 -----PTSHSKLEKAIRTSSGLLSSSSQFISNILHGHNNAGNQFNTLTDKLP-DCNQSHATASMQ 639
                 ..||..|:.|..::.|:..|||       |.|:|. :....::..:| ..:.||:.....
 Worm   211 DSSDFNDSHDTLDIAGTSAHGVADSSS-------HHHHNY-SMTAPVSPNVPLSASSSHSEGWKY 267

  Fly   640 KSKSLSNVGQFVAKRMWRSRSKSQNKRSYLKSSIPTLKWYPSEHFLWISESGESFQIVETNLTRL 704
            .|:.|          :|:.:.|.....:...||.....|...:...|.|..|....:....|..|
 Worm   268 SSQKL----------LWKLKPKYAYSHASSTSSSTDSAWKSLDSMTWRSVDGAEVVLRGARLENL 322

  Fly   705 SKIESDIVKNFALEKIQEL----NIGNIEDLKISPQKRRCVPKKKSLTTSFFDNGKKDDQNP--- 762
            |:||...::..|.:::.::    |:|..:.|:   |||:.: .|.:.|.:..|..::....|   
 Worm   323 SEIERSALQLLAAQRLTKMLPGVNLGKPKALR---QKRQKL-VKSNRTPTVADVQRRASGTPMPE 383

  Fly   763 RSVLFGTSLECC------LERDSK------RNVTMEDRSKY-----------------------S 792
            ...:||.||..|      |:::|:      ..|.|.::||.                       |
 Worm   384 EKRVFGVSLAMCMLNEKRLDQESRCRSLDDSTVIMLNKSKAKPTKSEPEMMSHTMPEDRKWLYPS 448

  Fly   793 LLSMFRGSGSTPGSVLKLNDNVRSCES-LPSKSLEYGSTELSA--------YVRGSFSNISKPLA 848
            ..:::..|.|.|.|...:..:.....| |||.:|      |||        .|.|.|....:| |
 Worm   449 TQNLYPTSTSNPSSPSPIMGSAPPTGSILPSANL------LSAEPTTCEPQQVTGRFLKKQRP-A 506

  Fly   849 SLSQSENEDTELNFVKAYQEHSQLMVPIFVNNCIDYLEDNGLQQVGLFRVSTSKKRVKQLREEFD 913
            |.|.|.:.|..::.|..:    .|.||..|.||..||...||.|||||||:.:.||.:|||...:
 Worm   507 SASFSCSLDANIDDVDPH----ALQVPKIVENCTQYLMTYGLTQVGLFRVAGNTKRCRQLRNALE 567

  Fly   914 K-----DIYFGISVDTCPHDVATLLKEFLRDLPEPLLCNTLYLTFLKTQRIRNRRLQLEAISHLI 973
            |     .|...:..:|..|||||||||:.||||:.||....|..::...:: |...::|||..|.
 Worm   568 KVGGGAVINDNMVENTTSHDVATLLKEYFRDLPQSLLPGEHYSAYIGAAKL-NVDERIEAIRLLF 631

  Fly   974 RLLPIPHRDTLYVLLVFLAKVAAHSDDIWSTEGCCLTLGNKMDSYNLATVFAPNILRSTHLTFSR 1038
            .||..|..|||:|||.||.:|:.||.|....:|..|: |||||:.||||:|||:|||..|     
 Worm   632 ALLVSPILDTLFVLLKFLHEVSCHSQDRHDEDGELLS-GNKMDARNLATIFAPSILRVDH----- 690

  Fly  1039 DKEQENMID---AINVVRTMINHYEEIFNISAELLNVIYTQALEACPEKLYELISTKVYGTEWTQ 1100
            ||..|.:.:   .:.:|.|||::.||||.|..||...|||:..|..|::|..:::      ..::
 Worm   691 DKLHETLAENEHQVIIVETMISNVEEIFKIPKELQCKIYTKLRETEPDRLDRILN------HLSK 749

  Fly  1101 QQIDDPQPGSLSDVLLEP-PI-----HGKRYENINDFNNINFKRCQDKRRDHSDPDKKKNNNENL 1159
            ....:..||    |||.| |.     ...|:....|.::|.  |.....|:.:...|.|..::. 
 Worm   750 MDSHESHPG----VLLSPFPATLEEDSSPRHHRHGDHSHIG--RQSPLARELTTNGKVKVQSQR- 807

  Fly  1160 EIITASLKISVAE-QSHISLKE-----PIKEQE-PITSYKQFSRSTLPTSISDVGVNTLRTDGAK 1217
               :.|...|:.: |:..|..|     |...|: |..|:.....||..|::|   ..|....|.|
 Worm   808 ---SGSWPFSLTKTQTSPSRPEGQHFFPADSQDGPGPSHSHHDPSTSGTTMS---ATTTPGPGRK 866

  Fly  1218 LENKMK 1223
            .:..||
 Worm   867 TDFSMK 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP102ANP_001245416.1 RhoGAP 874..1069 CDD:295372 90/202 (45%)
rga-6NP_491465.2 RhoGAP_ARHGAP6 520..724 CDD:239841 92/214 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159159
Domainoid 1 1.000 121 1.000 Domainoid score I3560
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006356
OrthoInspector 1 1.000 - - oto17959
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12635
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3427
SonicParanoid 1 1.000 - - X6395
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.970

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