DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP102A and arhgap6

DIOPT Version :9

Sequence 1:NP_001245416.1 Gene:RhoGAP102A / 43781 FlyBaseID:FBgn0259216 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_017210032.1 Gene:arhgap6 / 101882360 -ID:- Length:635 Species:Danio rerio


Alignment Length:661 Identity:163/661 - (24%)
Similarity:261/661 - (39%) Gaps:168/661 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   712 VKNFALEKIQELNIGNIEDLKISPQKRRC----------VPK-----KKSLTTSFFDNGK-KDDQ 760
            :::.:::.:.||....::::.::   |.|          :||     ||||........| |.|:
Zfish     1 MQSVSIQSLSELERVRLQEVSLA---RLCKDFDLGCQITIPKDGQKRKKSLRRKLDSLSKEKRDK 62

  Fly   761 NPRSVLFGTSLECCLERDSKRNVTMEDRSKYSLLSMFRGSGSTPGSVLKLNDNVR---------S 816
            ......||..|...:..|.::....|:|.:       |||     |.|.|:.:.|         |
Zfish    63 ESEPQAFGVPLSQVIFNDRRQKQQQEEREQ-------RGS-----SPLHLHTHTRRNTSRDLSSS 115

  Fly   817 CESLPSKSLEY---------GSTELSAYVRGSFS------------------NISKPLASLSQSE 854
            ..||.|.|..:         ..|.|.:..||..|                  .:|.|:...|:.:
Zfish   116 NSSLSSSSETHTDNNNTPQTPETALRSRRRGGVSVDCITDLDDSDSRLLEALQLSMPVDPSSEKK 180

  Fly   855 NEDTELNFVKAYQEHSQLMVPIFVNNCIDYLEDNGLQQVGLFRVSTSKKRVKQLREEFDKDIYFG 919
            .:..:.:..|.........||..::.|..:|:..|||.||:|||.:|||||:||||.||:.....
Zfish   181 KKKKKTSGEKLSLNPIYRQVPRVLDCCCQHLQRYGLQTVGIFRVGSSKKRVRQLREAFDQGAEVI 245

  Fly   920 ISVDTCPHDVATLLKEFLRDLPEPLLCNTLYLTFLKTQRI----RNRRLQLEAISHLIRLLPIPH 980
            :......||||.||||||||:|:|||...||..|:....:    ::|.:||     |:.|||..:
Zfish   246 LDDRHSVHDVAALLKEFLRDMPDPLLTRELYAAFISCASLEKSEQHRIIQL-----LLCLLPACN 305

  Fly   981 RDTLYVLLVFLAKVAAHSDDIWSTEGCCLTLGNKMDSYNLATVFAPNILRSTHLTFSRDKE---- 1041
            .|||..||.||:.||.|:::.....| ...:||||.|.||||:|.||:|   |...|.:||    
Zfish   306 SDTLQCLLHFLSTVAKHAENSCDEHG-NQVMGNKMTSLNLATIFGPNLL---HKQKSSEKEFSVQ 366

  Fly  1042 ----QENMIDAINVVRTMINHYEEIFNISAELLNVIYTQALEACPEKLYELISTKVYGTEWTQQQ 1102
                .|.....|:||:.||:.:..:|.|||||.|.:....|:...:.:..|:..|....|.:...
Zfish   367 SSVRMEESAAIISVVQYMIDKHHTLFMISAELQNEVLLSLLDTDSDVVDYLMRRKTPQCEDSVCS 431

  Fly  1103 IDDPQPGSLSDVLLEPPIH------GKRYENINDFNNINFKRCQDKRRDHSDPDKKKNNNENL-- 1159
            ..:..|...:..:|....|      ...:.:::..:.:||  |..  ..|:|..:..::..::  
Zfish   432 SGEVSPYDNNSPVLSEWFHPSGSSLANTHHHLSSNSAVNF--CLS--ATHTDSGESLHDEAHVWR 492

  Fly  1160 -----------EIITAS-------------------LKISVAEQSHISLKEPIKEQEPITSYKQF 1194
                       :::|.|                   .|..:...:|.:...||.|:.. |:..|.
Zfish   493 TRHTLLTGLHDKLLTGSDGNLYKRASSDVFYDDDRDAKPEMQTSNHQTPHRPITERNK-TALSQS 556

  Fly  1195 SRSTLPTSISDVGVNTLRTDGAKLENKMKILTSNINKQDIPIKTTYKRQNLIS------------ 1247
            ..:..|.|                       .|..:|||..:......|.|::            
Zfish   557 EEAEAPVS-----------------------QSASSKQDDRLPAAASMQPLVNSCHGAQGSSSHI 598

  Fly  1248 --SSRRISQEP 1256
              ||:.:.|.|
Zfish   599 TVSSKSLDQHP 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP102ANP_001245416.1 RhoGAP 874..1069 CDD:295372 87/206 (42%)
arhgap6XP_017210032.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580440
Domainoid 1 1.000 122 1.000 Domainoid score I5601
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006356
OrthoInspector 1 1.000 - - otm24611
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12635
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6395
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.030

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