DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP102A and arhgap11a.2

DIOPT Version :9

Sequence 1:NP_001245416.1 Gene:RhoGAP102A / 43781 FlyBaseID:FBgn0259216 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_012824473.1 Gene:arhgap11a.2 / 100495220 XenbaseID:XB-GENE-5843957 Length:804 Species:Xenopus tropicalis


Alignment Length:558 Identity:125/558 - (22%)
Similarity:212/558 - (37%) Gaps:152/558 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   798 RGSGSTPGSVL-----KLNDNVRSCESLPSKSLEYGSTELSAYVRGSFSNISKPLASLSQSENED 857
            |.:|  |.|.:     .|...:|..:.:||..::..::.     .|.|..   ||..|.....|.
 Frog     2 RATG--PSSAIIQHLKALGVKIRLPKKVPSPDVQRKTSS-----HGLFGT---PLHCLPPCNTEG 56

  Fly   858 TELNFVKAYQEHSQLMVPIFVNNCIDYLEDNGLQQVGLFRVSTSKKRVKQLREEFDKDIYFGISV 922
            .               :|.||.:...:|..: |...||||.|.|..|::.|:.:.:.:   ..|:
 Frog    57 N---------------IPQFVVDTCQFLSCH-LGTEGLFRKSGSVTRIRTLKAQLESN---ECSL 102

  Fly   923 DTC-PHDVATLLKEFLRDLPEPLLCNTLYLTFLKTQRIRNRRLQLEAISHLIRLLPIPHRDTLYV 986
            ::. |.|||.|||:|.|:||:||:...|.....:...|.:...::.|...:..|||..|..||..
 Frog   103 ESAQPSDVAALLKQFFRELPQPLIPLELQDPLCQIHEILSEESRVSATILVTCLLPAIHMGTLRY 167

  Fly   987 LLVFLAKVAAHSDDIWSTEGCCLTLGNKMDSYNLATVFAPNILRST----HLTFSRDKEQENMID 1047
            ...||..||:..::            |:|||.|||.|.|||:..||    .||.|.:::.:..  
 Frog   168 FCTFLQSVASRCNE------------NRMDSANLAVVLAPNLFASTGLGERLTHSTERQLQLQ-- 218

  Fly  1048 AINVVRTMINHYEEIFNISAELLNVIYTQALEACPEKLYELISTKVYGTEWTQQQ------IDD- 1105
             ..|::|:|.:...|..:.:.:|:.| ..|.:|..|:|.    |...|....:::      ::: 
 Frog   219 -TAVMQTLIQNASNIGQLPSFILSKI-PLAHDAVEEELV----TPSGGVNRRRRRRSMSGLVNEA 277

  Fly  1106 -----PQPGSLSDVLLEPPIHGKRYENINDFNNI-----NFKRCQDKR----RDHSD-------- 1148
                 |..|:.::||.:......::|........     :.:.|..|:    ||.:|        
 Frog   278 LSKLKPGRGASTNVLDQATGEEGQHERYKSKRKASEDSGSGEHCTAKKRKSLRDITDEKLYNEDL 342

  Fly  1149 -----------------PDKKKNNNENLEIITASLKISVAEQS---------------------- 1174
                             ||...:.:..||:.|.|..|....:|                      
 Frog   343 CEPVNSVSPQRVFVDASPDLLSSPSTPLELSTGSPAILATPESSSRGQRVKGKRKESKRPKRMHS 407

  Fly  1175 -HISLK-EPIKEQEPI-TSYKQFSRSTLPTSISDVGVNTLRTDGAKLE----NKMKILTSN---- 1228
             ||.:. ..::.:|.: :|.:.|.|    ..:|...||:...||..||    |.||.:.:.    
 Frog   408 GHICVSPAQLERKEKVRSSMRLFHR----MRVSKQSVNSGTLDGKNLETSGWNLMKRMVAEALEG 468

  Fly  1229 --INKQD-----IPIKTTYKRQNLIS---SSRRISQEP 1256
              .|.:|     :.:|.:.:...|||   |.:..|..|
 Frog   469 PIFNGRDFRVAPLSLKVSGQENPLISEDVSHKHPSSPP 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP102ANP_001245416.1 RhoGAP 874..1069 CDD:295372 60/199 (30%)
arhgap11a.2XP_012824473.1 RhoGAP-ARHGAP11A 41..240 CDD:239859 65/235 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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