DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP102A and Arhgap6

DIOPT Version :9

Sequence 1:NP_001245416.1 Gene:RhoGAP102A / 43781 FlyBaseID:FBgn0259216 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_017457773.1 Gene:Arhgap6 / 100363276 RGDID:2323364 Length:985 Species:Rattus norvegicus


Alignment Length:663 Identity:200/663 - (30%)
Similarity:298/663 - (44%) Gaps:109/663 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   487 GVLNPPGISAGLHKAVQTLNAWPLI---------ALDFIRGNE-SSLNLKNAHLEWL--RLEDER 539
            |..:..|.|.  .|..||.:..|.:         |.|.:||:. |.||......|.|  ||....
  Rat    20 GTASTKGFSK--RKLRQTRSLDPALISGCGSEMGAEDGLRGSTVSRLNSPQLSAESLGSRLASSP 82

  Fly   540 SHMQLERDKNPIELRSKVNPLQIASPANTSSYSKCTSAPTSPTSHSKLEKAIRTS-SGLLSSSSQ 603
            ....|...:.|.       |..:.|..:|.|    |....||:.....:..:..| |||..|.:.
  Rat    83 RSQHLRATRFPA-------PRPLCSSFSTPS----TPQEKSPSGSFHFDYEVPLSRSGLKKSMAW 136

  Fly   604 FISNILHGHNNAGNQFNTLTDKLPDCNQSHATASMQKSKSLSNVGQFVAKRMWRSRSKSQ---NK 665
            .:.::|.|..:..|                 .||:..|......|.|.:.|.|..:.|.|   |.
  Rat   137 DLPSVLTGSVSGRN-----------------PASILGSSGGGPNGIFASPRRWLQQRKFQPPPNS 184

  Fly   666 RSYLKSSIPTLKWYPSEHFLWISESGESFQIVETNLTRLSKIESDIVKNFALEKI-QELNIGNIE 729
            ||:     |.:.|.....|.|.|.||.|.::....:..||::|...::..|..:: |:.::|...
  Rat   185 RSH-----PYVVWRSEGDFTWNSMSGRSVRLRSVPIQSLSELERARLQEVAFYQLQQDCDLGCQI 244

  Fly   730 DLKISPQKRRCVPKKKSLTTSFFDNGKKDDQNPRSV--LFGTSLECCLERDS----KRNVTME-- 786
            .:....|||     ||||.......||:.:::...:  .||..|...:..|.    |:::..|  
  Rat   245 TIPKDGQKR-----KKSLRKKLDSLGKEKNKDKEFIPQAFGMPLSQVIANDRAYKLKQDLQREEQ 304

  Fly   787 -DRSKY--SLLSMFRGSGSTPGSVLKLNDNVRSCESLPSKSLEYGSTELS--AYVRGSFS----- 841
             |.|.:  |||..  |:......:...|.::.|....|::|....:.|.:  |..||:.|     
  Rat   305 KDASDFVSSLLPF--GNKKQNKELSSSNSSLSSTSETPNESTSPNTPEPAPRARRRGAMSVDSIT 367

  Fly   842 ----NISKPLASL-----SQSENE-----DTELNFVKAYQEHSQLMVPIFVNNCIDYLEDNGLQQ 892
                |.|:.|.:|     ::::|:     |.:|:....|::     ||..|::|..:||.:|||.
  Rat   368 DLDDNQSRLLEALQLSLPAEAQNKKQKARDKKLSLNPIYRQ-----VPRLVDSCCQHLEKHGLQT 427

  Fly   893 VGLFRVSTSKKRVKQLREEFDKDIYFGISVDTCPHDVATLLKEFLRDLPEPLLCNTLYLTFLKTQ 957
            ||:|||.:|||||:|||||||:.:...:..:...||||.||||||||:|:|||...||..|:.|.
  Rat   428 VGIFRVGSSKKRVRQLREEFDRGVDVCLEEEHSVHDVAALLKEFLRDMPDPLLTRELYTAFINTL 492

  Fly   958 RIRNRRLQLEAISHLIRLLPIPHRDTLYVLLVFLAKVAAHSDDIWSTEGCCLTLGNKMDSYNLAT 1022
            .:.... ||..:..||.|||..:.|||:.||.||:.||.|::|..|.:|..:| ||||.|.||||
  Rat   493 LLEPEE-QLGTLQLLIYLLPPCNCDTLHRLLQFLSIVARHAEDNVSKDGQEVT-GNKMTSLNLAT 555

  Fly  1023 VFAPNILRSTHLTFSRDKE--------QENMIDAINVVRTMINHYEEIFNISAELLNVIYTQALE 1079
            :|.||:|   |...|.|||        .|.....|.||:.||.:||.:|.:..:|.|.:....||
  Rat   556 IFGPNLL---HKQKSSDKEYSVQSSARAEESTAIIAVVQKMIENYEALFMVPPDLQNEVLISLLE 617

  Fly  1080 ACPEKLYELISTK 1092
            ..|:.:..|:..|
  Rat   618 TDPDVVDYLLRRK 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP102ANP_001245416.1 RhoGAP 874..1069 CDD:295372 94/202 (47%)
Arhgap6XP_017457773.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340635
Domainoid 1 1.000 140 1.000 Domainoid score I4637
eggNOG 1 0.900 - - E1_KOG2710
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006356
OrthoInspector 1 1.000 - - otm46238
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12635
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6395
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.930

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