DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1674 and Synpo

DIOPT Version :9

Sequence 1:NP_001245414.1 Gene:CG1674 / 43780 FlyBaseID:FBgn0039897 Length:905 Species:Drosophila melanogaster
Sequence 2:XP_006525531.1 Gene:Synpo / 104027 MGIID:1099446 Length:1140 Species:Mus musculus


Alignment Length:1088 Identity:198/1088 - (18%)
Similarity:336/1088 - (30%) Gaps:371/1088 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 APDLKMENTKNSIP-SPI--KPNVNDQTSSASDLTAENTKADHDSLNKP-KDFNNQILNIISDID 104
            :|.|..|..:...| |||  .|..:.:.:|.|    :.....|.|...| :.....|:...|:..
Mouse   187 SPKLNQEALQTGRPLSPIGHAPGPSVKPTSPS----KPGSPKHPSPQSPSRGVAGHIMEGYSEEA 247

  Fly   105 INIKAQEKITQLKEQELKLI--QKQND---LANEIHKQQILAKQLSAQNQLKQNECQSGELDL-- 162
            ..::..||:.. :|:|:.|:  .|:|.   .||.:|..|....|.|:.|. ...|..|...|:  
Mouse   248 SLLRHLEKVAS-EEEEVPLVVYLKENAALLTANGLHLSQSRETQQSSPNP-PDTEVPSPAADINQ 310

  Fly   163 -----------------HSQYQNERGGPTSTLYQEKNIASKQIPVVHNNMNC----TVEKKRG-- 204
                             |||       ||:.:.|....|...:|...:...|    |::.|.|  
Mouse   311 NPSSPNATLTTLASSSHHSQ-------PTADINQNPPAAITPVPQNSSQAQCSPNGTLDSKPGTL 368

  Fly   205 -----------------------------------------------------------YRPSDL 210
                                                                       .:||.|
Mouse   369 CADDGQSPVPAEEVRSSILLIDKVSAPPSAASTFSREATPLSSSGPPAADLMSSSLLIDMQPSTL 433

  Fly   211 IDPSKRQ----YLLSLSKKLWQE-----KKESANVSKTVDLRKIFTPATDAAEILP-KNRKLYAS 265
            :.|::::    ..::...|::.|     .|.::.|::|.....|.:|.|...|..| ..|:.:..
Mouse   434 VAPAEQEVPGHVAVTTPTKVYSEVHLTLAKPASVVNRTARPFGIQSPGTSQIEQSPMMGRRQFGE 498

  Fly   266 SAFYSPTLHPTVEDQVELARRISHSLSDISNQTSK---GQSMYVNRK---KRSDKWVHEGGSQGN 324
            .|:..|                :.|::|.|.|..:   .:|..|.|:   :||.  |.|....||
Mouse   499 KAWAPP----------------ASSMADRSPQPQRHIMSRSPMVERRLLGQRSP--VLERRPLGN 545

  Fly   325 DAINPFKENSETKSTMEVA-KLEKIPLKLIMNPNGKVRDYNSLKDLINVEAGLLSPDNCAELITA 388
              ..|....:||.||..|| ::...|....:.|:...:. :.||       |.::|.|...::..
Mouse   546 --FTPPPTYAETLSTAPVASRVRSPPSYSTLYPSSDPKP-SHLK-------GQVAPANKTGILEE 600

  Fly   389 LQLHQGRGAELFA----------------------KRRRKADNWVVDESHSGTQYHPSGI-PDFQ 430
            ....:|....:|.                      |||::      |....|.:..|..: .:..
Mouse   601 SMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQR------DHGEVGMEEEPFALGAEAS 659

  Fly   431 QYQQRPVLSPNILPA-----------------------------YSDAGKHRVQLNIHQNQLIEK 466
            .:||.|:......||                             .|:|.....:|...:...:||
Mouse   660 NFQQEPIARDRASPAAAEEAVPEWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQSRMEK 724

  Fly   467 Y---SKPGLQVVQSP---------WKAALQTGSASSAFLEDTKS--FSPPA------------LT 505
            |   |....::.:.|         ||   .|.:|...|...:.|  .:|||            |.
Mouse   725 YVIESSGHAELARCPSPTMSLPSSWK---YTTNAPGGFRVASLSPARTPPASLYHGYLPENGVLR 786

  Fly   506 PIPSSQAGSK------DWTDANEPMPHGSSRRNTNAVAS---SPRSV---------IVPSNPQRD 552
            |.|:.|...:      ..:...|| ...|||..::...|   |||:.         :||:.|:..
Mouse   787 PEPTKQQPYQMRPSLYALSPVKEP-AKASSRATSSRTPSRTVSPRAASPAKPSSLDLVPNLPRAG 850

  Fly   553 LAYTPCV---AQGWGGRSVELPKDSFQSNESQSSWQTE-----------PHIGRADDSNPSFNNY 603
            |..:|.:   ::...|......:||.|......::.::           |...:|  ..|||:  
Mouse   851 LPPSPALPRPSRSSPGLYTAPVQDSLQPTAVSPTYSSDISPVSPSRAWSPRAKQA--PRPSFS-- 911

  Fly   604 IFGERLTSNFAFDVQNRLHSLENFQKYFLEYQRLELEILRNRESSRVLQHDAYESLLDFTPQNEF 668
                  |.|...:.|:|..||.....:.....|....:            |.:.|...:.|....
Mouse   912 ------TRNAGIEAQDRPESLPTSPPWTPAASRPPSSL------------DGWVSPGPWEPGRGS 958

  Fly   669 KVISGEDLKVNCDLDEKVNVRELIQSFEKQNTTDLRHDAAPIEGLYVPKEISLSSYAAPSQQCEI 733
            .:.|...|.....:....:.|.:   ...::.|:.|..:..::.|.....|:.:...:.|     
Mouse   959 SMSSPPPLPPPPPMSPSWSERSV---SPLRSETEARPPSRQLQALLARNIINAARRKSAS----- 1015

  Fly   734 HSKHFERPYEDTFPRTFPRNNYSANNNFPGNDGIGEFPLSKPTGLTTGTLHQQPYSPTSYKKTVP 798
                         ||..|.....              |.|.|.|         |..|.:..::..
Mouse  1016 -------------PRPAPAETLR--------------PFSPPQG---------PPPPPARMRSPQ 1044

  Fly   799 GLEKVENF--ARYEQPDRKRLTSGSPQYLNALQNSQVRNASPIPF-------GTSLNEQTSWPPR 854
            ......||  |.:....|..|..| |....:.::.|...:.|.|:       ..||:.:.|    
Mouse  1045 PASPARNFRGAAFSPIPRSPLPIG-PSSCASPRSPQAAPSRPFPYRRSPTDSDVSLDSEDS---- 1104

  Fly   855 SVLLQGGSPSPLPNHVQTFNKCAKGW-GSIPVKQQSYSSQYNLPGNLP 901
                  |..||   .:..:|.|.:|| ||:.:|:          |:||
Mouse  1105 ------GLKSP---GILGYNICPRGWNGSLRLKR----------GSLP 1133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1674NP_001245414.1 None
SynpoXP_006525531.1 PTZ00449 <51..367 CDD:185628 43/192 (22%)
PRK13914 <254..>371 CDD:237555 29/125 (23%)
PHA03247 <291..583 CDD:223021 56/320 (18%)
PHA03247 <815..1087 CDD:223021 56/338 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838014
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24217
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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