DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1674 and synpo

DIOPT Version :9

Sequence 1:NP_001245414.1 Gene:CG1674 / 43780 FlyBaseID:FBgn0039897 Length:905 Species:Drosophila melanogaster
Sequence 2:XP_017210011.2 Gene:synpo / 100536545 -ID:- Length:873 Species:Danio rerio


Alignment Length:1014 Identity:192/1014 - (18%)
Similarity:307/1014 - (30%) Gaps:427/1014 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 MENTKNSIPSPIKPNVNDQTSSASDLTAENTKADHDSLNKPKDFNNQILNIISDIDINIKAQEKI 113
            :||..|  ||...|...|:        .:.|...|..||. ::....:......|..|....|:.
Zfish   113 LENVIN--PSNECPQTWDK--------PQPTDNQHRELNN-RNIKTALARSAGGISNNNNIMEEA 166

  Fly   114 TQLKEQE------LKLIQKQNDLANEIHKQQ---ILAKQLSAQNQLKQNECQSGELDLHSQYQNE 169
            .:...::      |.:.:|..:|:.|..|.:   ..|.|.|:|:.::..|.|:|       |..:
Zfish   167 GEFTHEDEESRHFLPVNEKDEELSEEHVKDEDTISTAMQRSSQDGVRYEEVQNG-------YSKQ 224

  Fly   170 RGGPTSTLYQEKNI------------------ASKQIPVVHNNMN-CTVEKKRGYRP-------- 207
            ..|.::|..|:..:                  .|.:||......| .::..:..:.|        
Zfish   225 CNGKSTTTKQQTIVNRTARPFFSPTTVGSPKATSPEIPSSMTPQNFSSMHTRPVFSPPPPPPPSY 289

  Fly   208 --------SDLIDPSKR-----------------QYLLSLSKKL--------------------- 226
                    .:...||.|                 ::|.|.|:.:                     
Zfish   290 PTPPLPSHPETHSPSPRASSFYIRPSVPRPTFVPEHLKSESRPVTPIKTGILDEGRVRRGTRKSM 354

  Fly   227 --WQEK------KESANVSKTVDLRKIFTPATDAAEILPKNRKLYASSAFYSPTLHPTVEDQVEL 283
              :|||      .|..::.:..|::|...|..|||:                      .|:.:.|
Zfish   355 FTFQEKPTVAPSPELLSLVQGTDVKKKAKPQPDAAQ----------------------EEELLAL 397

  Fly   284 ARRISHSLSDISNQTSKGQSMYVNRKKRSDKWVHEGGSQGNDAINPFKENSETKSTMEVAKLEKI 348
            ....|:.|:                 |..::.:||      :|:.| :..|..||:...|:.|..
Zfish   398 GAEASNFLA-----------------KNEEEDIHE------EAVVP-EWASSLKSSRTRARTEHK 438

  Fly   349 PLKLIMNPNGKVRDYNSLKDLINVEAGLLSPDNCAELITALQLHQGRGAELFAKRRRKADNWVVD 413
            |.:.:.|.:||                                    ||:|||||:.:.:.:|.|
Zfish   439 PEQALTNASGK------------------------------------GAQLFAKRQSRMEKFVHD 467

  Fly   414 ----ESHSGTQ------YHPSGIP--------------------DFQQYQQRPVL--------SP 440
                .|.|.|.      .:||.:|                    ..||..|:..:        .|
Zfish   468 SKDLRSPSPTMSLPPSWVYPSNMPGRVKAIVNSSNISAQISKTLQAQQATQKKTIPAKTPAPAPP 532

  Fly   441 NILPAYSDAGKHRVQLNIHQ-----------NQLIEKYS------KP---------GLQVVQSPW 479
            ..:|..:...|..::|:.||           |...:.||      ||         .|....||:
Zfish   533 PEVPLENGCTKIEMELSRHQPYQLSSSLFIFNPTKDPYSTLPRSPKPVSQSYSRQTSLPTSPSPY 597

  Fly   480 KAALQTGSASSAFLEDTKSFSPPALTPIPSSQAGSKDWTDANEPMPHGSSRRNTNA---VASSPR 541
                    .||:.......|||| |||   ..|||     .:.|....|.|.|..|   |.|:.:
Zfish   598 --------TSSSSYRSAHCFSPP-LTP---QTAGS-----ISSPERVASPRSNVQAPRPVFSAKK 645

  Fly   542 SVIVPSNPQRDLAYTPCVAQGWGGRSVELPKDSFQSNESQSSWQTEPHIGRADDSNPSFNNYIFG 606
            :.|.|...|..||.:|..:.|               :.:.:|.:| |::.|              
Zfish   646 AGIAPQIKQEILAPSPVPSPG---------------STTPTSSRT-PNLSR-------------- 680

  Fly   607 ERLTSNFAFDVQNRLHSLENFQKYFLEYQRLELEILRNRESSRVLQHDAYESLLDFTPQNEFKVI 671
             |.||.                           |:|    ||.|.....  ||:..:|       
Zfish   681 -RFTSP---------------------------EVL----SSGVWSPSG--SLVSSSP------- 704

  Fly   672 SGEDLKVNCDLDEKVNVRELIQSFEKQNTTDLRHDAAPIEGLYVPKEISLSSYAAP-SQQC---- 731
                      :.:...:.:.:..:|..:|:.        .|:|.| .||.|..:.| ..:|    
Zfish   705 ----------IYKPTPIHKPVPKYEPTDTSS--------PGVYKP-TISSSPVSPPWENRCQSPA 750

  Fly   732 ---EIHSKHFERPYEDTFPRTFPRN--NYSANNNFPGNDGIGEFPLSKPTGLTTGTLHQQPYSPT 791
               :..:.|          |...:|  |.:...|.| :.|....|:|      .|||      |.
Zfish   751 VIPDTKANH----------RILAKNIINAAKRKNSP-SPGRNNLPIS------PGTL------PY 792

  Fly   792 SYKKTVPGLEKVENFARYEQPDRKRLTSGSPQYLNALQNSQVR---NASPIPFGTSLNEQTSWPP 853
            .||...|...::.. ||     ...|||.||   ..:..|.||   ..|......||..:.|..|
Zfish   793 EYKPISPFQPRMLG-AR-----SPTLTSPSP---TRMMQSPVRLYNTRSLTDSDASLESEDSPAP 848

  Fly   854 RSVLLQGGSPSPLPNHVQTFNKCAKGWGS-IPVKQQSYS 891
            ||                 :|.|.:||.: :.||:...|
Zfish   849 RS-----------------YNTCPRGWSAGLQVKRGGIS 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1674NP_001245414.1 None
synpoXP_017210011.2 Atrophin-1 <565..862 CDD:331285 95/452 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581818
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24217
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.030

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