DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1674 and synpo2l

DIOPT Version :10

Sequence 1:NP_001245414.1 Gene:CG1674 / 43780 FlyBaseID:FBgn0039897 Length:905 Species:Drosophila melanogaster
Sequence 2:XP_002935810.2 Gene:synpo2l / 100497269 XenbaseID:XB-GENE-6467118 Length:1096 Species:Xenopus tropicalis


Alignment Length:974 Identity:197/974 - (20%)
Similarity:313/974 - (32%) Gaps:304/974 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 TKNSIPSPIKPN---VNDQTSS-----ASDLTAENTKADH-DSLNKPKDFNNQILNIISDIDINI 107
            |:..:|||..||   ..|..||     ::.||:...:..| :|:..|.|.........||.||..
 Frog    97 TQRVLPSPSSPNRIRSPDPPSSWAATQSTVLTSAQPRLLHLESITSPPDSEAYYGETDSDADIQA 161

  Fly   108 KAQEKITQLKEQELKLIQKQNDLANEIHKQQILAKQLSAQNQLKQNECQSGELDLHSQYQNERGG 172
            .:....:..:...|:      ..|.|.|::.......|......:.|.:...|...|.|::..||
 Frog   162 SSAHPPSNQQHHSLQ------PSAPEKHRRARKKSPRSPPGSSNKTESEQKSLSEMSGYESGPGG 220

  Fly   173 PTSTLYQEK-NIASKQIPVVHNNMNCTVEKK----RGYRPSDLID-------PSKRQYLL-SLSK 224
            ......|.. .:|.::|  ::.......|..    .|:.|||.::       ||....|| .::|
 Frog   221 VAECALQPTIGVAKREI--IYQPGGSRAETPFSDVEGFLPSDDVEQLPSVTSPSPESLLLPHVTK 283

  Fly   225 KLWQEK---KESANVSKTVDLRKIFTPATDAAEILPKNRKLYASSAFYSPTLHPTVEDQVELARR 286
            .:..|:   .....|...|| ..:.|..:|.|    :..||:.|.:    .....|::.....|.
 Frog   284 SIRAERHLIPMIGPVEHPVD-DDLTTTYSDKA----REAKLHRSES----VQEKNVKEARTKCRT 339

  Fly   287 ISHSLSDISNQTSKGQSMYVNRKKRSDKW--VHEGG------SQGNDAINPFKEN-------SET 336
            |:..|:|..|..|||..|:..|::|:.|:  |..|.      .:..|.:.|..|:       |:.
 Frog   340 IASLLTDAPNPHSKGVLMFKKRRQRAKKYTLVSYGSVDEDRYIEDEDGVFPTSESEFDEEGFSDA 404

  Fly   337 KSTMEVAKLEKIPLKLIMNPNGKVRDYNSLKDLINVEAGLLSPDNCAELITALQLHQGRGAELFA 401
            :|....:..:...|. |..|.         .|...||.||...             .|:|||||.
 Frog   405 RSLTNHSDWDSTYLD-IEKPK---------MDEQQVEKGLTEA-------------SGKGAELFE 446

  Fly   402 KRRRKADNWVVDESHSGTQYHPSGIPDFQQYQQRPVLSPNILPAYSDAGKHRVQLNIHQNQLIEK 466
            .:|::::...||..       |..||  ...|||   ..|.....:...|..:..|.:.:.::.|
 Frog   447 LQRQRSEQSPVDSV-------PLPIP--VPLQQR---KENQTAPVAPVRKKMLNGNANSSAIVNK 499

  Fly   467 YSKPGLQVVQSPWKAALQTGSASSAFLEDTKSFSPPALTP--IPSSQAGSKDWTDANEPMPHG-- 527
            ..:.|  |.:||..|:...            |.:||...|  :...||.|:.:..:..|...|  
 Frog   500 TQEMG--VSESPKVASTNI------------SITPPQSQPTQVDGVQASSEIFNRSARPFTPGQT 550

  Fly   528 -------------SSRRNTNAVASSPRSVIVPSNPQRDLAYTPCVAQGWGGRSVELPKDSFQSNE 579
                         ||.:.|:.:  .|..:|.||.....:..||..|:       ::|..|..|  
 Frog   551 GQRLVASSVVFKPSSPKKTSEI--PPSQIITPSPIPSFIPETPLNAE-------KVPICSVAS-- 604

  Fly   580 SQSSWQTEPHIGRADDSNPSFNNYIFGERLTSNFAFDVQNRLHSLENFQKYFLEYQRLELEILRN 644
                 ...|..||||  .||..|.:..||:..|                             |.|
 Frog   605 -----LYIPAPGRAD--MPSTTNQVQCERVPEN-----------------------------LSN 633

  Fly   645 RESSRVLQHDAYESLLDFTPQNEFKVISGEDLKVNCDLDEKVNVRELIQSFEKQNTTDLRHDAAP 709
            :.:.|......|.|    ||...    ||....|.     ..||.:|........|::       
 Frog   634 QTTPRTTTASIYLS----TPSRP----SGPQASVT-----HANVTKLTDCTPMTPTSN------- 678

  Fly   710 IEGLYVPKEISLSSYAAPSQQCEIHSKHFERPYEDTFPRTFPRNNYSANNNFPGNDGIG--EFPL 772
            :.||....::..|.|..|                          ..|||.:.   |.:.  |..:
 Frog   679 VIGLPSTGQVDASPYFTP--------------------------KISANQSL---DSVNTREQRI 714

  Fly   773 SKPTGLTTGTLHQ--------QPYSPTSYKKTVPG------LEKVENFARYEQ--------PDRK 815
            |.|.| .:|.|::        |.::....||.:|.      :::.:..::.||        |:..
 Frog   715 SVPVG-RSGILNEARKRGGKKQMFAKVEEKKCLPSPELLSMVQRTDGKSKQEQTGAGFESGPEED 778

  Fly   816 RLTSGSPQYLNALQNSQVRNASPIPFGTSLNEQTSWPPRSVLLQGG------------------- 861
            .|:.|: :..|.:|.|..:...|.|.......:|   |...:|.||                   
 Frog   779 FLSLGA-EACNFMQPSARKFKLPPPVAPKPQRRT---PVDEILNGGQDIPHLGGKGAELFAKRQS 839

  Fly   862 ----------------------SPSPLPNHVQTFNKCAKGWGSIPVKQQSYSSQYNLPGNLPYS 903
                                  :|||.|              |:| ....|||....|..:.|:
 Frog   840 RMDKFVVDSTPTSSSRPNSRPRTPSPTP--------------SLP-SSWKYSSNIRAPPPIAYN 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1674NP_001245414.1 None
synpo2lXP_002935810.2 PDZ_SYNPO2-like 8..84 CDD:467264
Blue background indicates that the domain is not in the aligned region.

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