DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1674 and synpo2b

DIOPT Version :9

Sequence 1:NP_001245414.1 Gene:CG1674 / 43780 FlyBaseID:FBgn0039897 Length:905 Species:Drosophila melanogaster
Sequence 2:XP_017211588.1 Gene:synpo2b / 100006620 ZFINID:ZDB-GENE-101230-1 Length:617 Species:Danio rerio


Alignment Length:658 Identity:134/658 - (20%)
Similarity:217/658 - (32%) Gaps:238/658 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 ENTKAD------HDSLNKPKDFNNQILNIISDIDINIKAQEKITQLKEQELKLIQKQNDLANEI- 134
            |.||.:      .:|...|:||              ...|||..|.:..:|:::|:..:..|.: 
Zfish    43 EETKREIVMPPPQESKQSPQDF--------------YARQEKHYQGQPFQLQMLQQSANSMNGLD 93

  Fly   135 -HKQQILAKQLSAQNQLKQNECQSGELDLHSQYQNE----RGGPTSTLYQEKNIASKQIPV--VH 192
             |:...:.|.|.:....|  ...||    |:|.|..    ||..:.|..:.:||....|||  ..
Zfish    94 PHQGSAVPKPLVSNRTAK--PFFSG----HNQGQKTFSPVRGVSSPTSKKPENIFKVPIPVNTTP 152

  Fly   193 NNMNCTVE----------------------KKRGYRPSDLIDPSKRQYLLSLSKKLWQEKKESAN 235
            |..:.|.:                      |:||...:||.:           :.|.|:|::..:
Zfish   153 NVWSPTSDVIASRDERIAIPAIKTGILPETKRRGANKTDLKE-----------RPLHQKKRDEKS 206

  Fly   236 VSKTVDLRKIFTPATDAAE--------------ILPKNRKLYASSAFYSPTLHPTVEDQVELARR 286
            :::.|....:.:...:|..              :|||                |.:.....|...
Zfish   207 LTEFVQEEDLLSLGAEACNFMQAPTVKQKNPPPVLPK----------------PVINPAHPLWSA 255

  Fly   287 ISHSLS-DISNQTSKGQSMYVNRKKRSDKWVHEGGS------QGNDAINPFKENSET---KSTME 341
            ..|::| .:...:|..|:|..|:.:......|...:      |....:......|:|   ||..|
Zfish   256 DGHAVSTSLLMTSSSAQAMGHNQVQAGHTKQHPAAAWTPEPHQTPHKLRAGPSKSKTPWIKSQSE 320

  Fly   342 VAKLEKIP-------LKLIMNPNGKVRDYNSLKDLINVEAGLLSPDNCAELITALQLHQGRGAEL 399
            ...:...|       |.....|:...::|:|       |.|.....|.          :|:||||
Zfish   321 ENSVASCPPQHLSTYLPASKAPSASHQEYSS-------ETGASEGLNL----------KGKGAEL 368

  Fly   400 FAKRRRKADNWVVD-ESHSGTQYHPS----GIPDFQQYQQ----------RPVLSP--------N 441
            ||:|:.:.:.::|| |:....:..||    .:|...:|..          .|:|||        .
Zfish   369 FARRQTRMEKFIVDNETVRTNKVRPSSPTLSMPSTWKYSSNIRAPPPVSYNPILSPFYPLAAVKQ 433

  Fly   442 ILPAYSDAGKHRV----------QLNI-----HQNQLIE------------------KYSKP--- 470
            ..||.|...|.:|          .||:     ||...::                  |.|||   
Zfish   434 PPPATSPKTKPKVNKEKKNPPPKHLNVLDVMKHQPYQLDSSLFTYNFTPEVEEAVSPKDSKPTSA 498

  Fly   471 ------GLQVVQSPWKAALQTGSASSA--FLEDTKSFSPPALTP--IPSSQAGSKDWTDANE--- 522
                  .....|:|.||   ||..|:.  |:..|.|....|:.|  :...|....|.| .|:   
Zfish   499 NSSSKISQTDKQNPSKA---TGEVSAVYPFVRQTTSNETAAVAPQQLDGKQLNMYDGT-RNKGIF 559

  Fly   523 --PMPHGSSRRNTNAVAS-------SPRSVIVPSNPQRDLAYTPCVAQGWGGRSVELPKDSF-QS 577
              .:|.|||..|.:..:|       :.|||: |..|:                    ||.|. :|
Zfish   560 SVRLPPGSSGGNVSVGSSALENNQYASRSVL-PVAPR--------------------PKFSAKKS 603

  Fly   578 NESQSSWQ 585
            |.:...|:
Zfish   604 NMTGKQWK 611



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581817
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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