DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-h and yellow-k

DIOPT Version :9

Sequence 1:NP_651912.3 Gene:yellow-h / 43779 FlyBaseID:FBgn0039896 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_648772.1 Gene:yellow-k / 39678 FlyBaseID:FBgn0036504 Length:342 Species:Drosophila melanogaster


Alignment Length:205 Identity:45/205 - (21%)
Similarity:79/205 - (38%) Gaps:51/205 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 IDVHNNRLFVTTPRWKNGVP----ASLGTLPFPPKESSPAIKPYPNWEAHGNPNNPDCSKLMSVY 151
            :.:|.:|:|::.....|..|    |......||    .|.: .:|:.:.|...::.|||.:...:
  Fly    40 LSMHFSRVFLSVNVESNDAPTLIEAQWPVSYFP----MPTV-VFPHIDVHSMGDHDDCSLVQQAH 99

  Fly   152 RTAVDRCDRIWLIDSGIVNATINLNQICPPKIVVYDLKSDELIVRYNLE------ASHVKQDSLH 210
            .:.||...|:|::|.|...:|      |.|::.|:||      :|.|.|      ..|:..:..|
  Fly   100 WSQVDALSRLWVMDIGFPGST------CSPRLFVFDL------MRNNAELLRIDCGHHIGANDTH 152

  Fly   211 SNIVVDIG---EDCDD---------------AHAIVSDVWRFGLLVYSLSKNRSWRVTNYNFYPD 257
            . :.|.:|   ..|:.               |:.|:...|.    ..||..|: :...|.:|...
  Fly   153 F-LTVQMGPKSPGCEHERHIYFILGKVPEILAYDILEQTWH----RLSLESNK-YENMNQSFPIK 211

  Fly   258 PFASDFNVYG 267
            |....|.:.|
  Fly   212 PVDFIFGIQG 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-hNP_651912.3 MRJP 148..440 CDD:281074 31/144 (22%)
yellow-kNP_648772.1 MRJP 102..>201 CDD:281074 26/116 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449275
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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