DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-h and yellow-c

DIOPT Version :9

Sequence 1:NP_651912.3 Gene:yellow-h / 43779 FlyBaseID:FBgn0039896 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001285947.1 Gene:yellow-c / 34879 FlyBaseID:FBgn0041713 Length:438 Species:Drosophila melanogaster


Alignment Length:422 Identity:161/422 - (38%)
Similarity:242/422 - (57%) Gaps:38/422 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 SESQLEIVYEWKYLDFLYSTFVQRQQSILNGDFVPKNNLPLGIDVHNNRLFVTTPRWKNGVPASL 113
            :.::||..:.||.|.|.:.|.....::..||.::.:||||||::...||:|||.||||.||.|:|
  Fly    23 ASAKLEEKFSWKQLAFDWPTPEAEAEAKSNGHYIVENNLPLGVERWQNRIFVTVPRWKAGVAATL 87

  Fly   114 GTLPFPPKESSPAIKPYPNWEAHGNP--------NNP------------------DCSKLMSVYR 152
            ..:.....|.||.:.|||:|||:..|        ..|                  |.|.::|.:|
  Fly    88 NYIDINSTEKSPKLHPYPSWEANKLPIDVQPQDQKTPSGGRLDADKAQDAGIQLKDNSTVISTFR 152

  Fly   153 TAVDRCDRIWLIDSGIVNATINLNQICPPKIVVYDLKSDELIVRYNLEASHVKQDSLHSNIVVDI 217
            ..||.|||:|::|:|:.:...:..||.|..|:|:|||:|.|:.|:.:.|...|:||..:|||||.
  Fly   153 IQVDVCDRLWVLDTGLADILGSPKQITPNSILVFDLKTDTLLRRFTIPADQTKEDSFFANIVVDA 217

  Fly   218 G-EDCDDAHAIVSDVWRFGLLVYSLSKNRSWRVTNYNFYPDPFASDFNVYGLNFQWLDGVFGMSI 281
            . .:|.||.|.:.|:..:|::||||..::|:||.:..|:.||...||||.|:||||.|||||:::
  Fly   218 DRSECQDAFAYIPDLGAYGVIVYSLRNDKSYRVKHNFFHFDPLHGDFNVGGVNFQWTDGVFGLAV 282

  Fly   282 YYNKKIMERVLYFHPMASFKEFMVPMNILLNESVWQTNTQEY-AKYFIPIGDRGYNSQSSTSGV- 344
            ........:.:|||.:||.|||.|...:|.|||........| .||   :||||.|.| ||:.| 
  Fly   283 GPMNPDHSKDIYFHALASTKEFKVSNRVLQNESHVTAGDSYYDFKY---VGDRGMNGQ-STAEVF 343

  Fly   345 -TRNGIMFFTQVHQDDIGCWDTSKPYTRAHLGKFHNMENSNLIQFPNDLKVDKEKDQNVWLISNR 408
             ...|::|:|||::|.|.||:..:|||....|...:  :|:.:.||||:|:|.|  ..:|::|::
  Fly   344 DPETGVIFYTQVNKDAIACWNIKRPYTPDTQGLIDS--DSHTLVFPNDMKIDNE--GTIWVLSDK 404

  Fly   409 LPIFLYSNLDYGEVNFRILKANVNKIIRNSVC 440
            :|.:||..||...||:|||......:|:.:.|
  Fly   405 MPTYLYKELDPSAVNYRILMGQNRDLIKGTPC 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-hNP_651912.3 MRJP 148..440 CDD:281074 119/295 (40%)
yellow-cNP_001285947.1 MRJP 148..436 CDD:281074 119/295 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449205
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D23419at7147
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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