DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31999 and efemp2b

DIOPT Version :9

Sequence 1:NP_001284712.1 Gene:CG31999 / 43777 FlyBaseID:FBgn0051999 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_001153830.1 Gene:efemp2b / 572703 ZFINID:ZDB-GENE-030219-125 Length:440 Species:Danio rerio


Alignment Length:555 Identity:160/555 - (28%)
Similarity:229/555 - (41%) Gaps:152/555 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 LPTQRCDNTIGSYICTRLQSCGTGYTLNAETGNCDDDDECTLSTHNCPSNYDCHNTRGSFRCYRK 450
            ||...|.:...|...|   .|..||..:.:|..|.|.:||......|.....|.|..|.:.|..:
Zfish    15 LPGTICQSPAESEAYT---DCTDGYEWDEQTQLCRDINECETILEACRGEMKCFNHYGGYLCLPR 76

  Fly   451 ISTMLTTRTTSTTVPPLSLENARRSFTSRYPYPLAVHPEYSQNNDSISTNRRVDCSPGFYRNTLG 515
            .|.::|...|::...|            ..|.|:   ||                          
Zfish    77 SSYVITAPETASQSEP------------NVPVPV---PE-------------------------- 100

  Fly   516 ACIDTNECMEQNPCGNHERCINTNGHFRCESLLQCSP-GYKSTVDGKSCIDIDECDTGEHNCGER 579
                 ||..  |||                      | ||::  .|:||:|||||:...|:|...
Zfish   101 -----NEAF--NPC----------------------PLGYRA--QGESCVDIDECELNMHDCQPS 134

  Fly   580 QICRNRNGGFVCSCPIGHELKRSIGGASTCVDTNECALEQRVCPLNAQCFNTIGAYYCECKAGFQ 644
            |.|.|..|.|.|.||.|:.   .||  ..|||.:||  ..|.|  ..:|.|..|::.|||:.|||
Zfish   135 QECINTVGTFTCQCPDGYS---KIG--IECVDIDEC--RYRYC--QHRCVNVPGSFSCECEPGFQ 190

  Fly   645 KKSDGNNSTQCFDIDECQV-IPGLCQQKCLNFWGGYRCTCNSGYQLGPDNRTCNDINECEVHKDY 708
            ..  |||.: |.|::||:: .|  |||:|.|.:|.:.|.|:.||.||||..:|||||||    .|
Zfish   191 LA--GNNRS-CVDVNECEMGAP--CQQRCYNSYGTFLCRCDQGYDLGPDGYSCNDINEC----SY 246

  Fly   709 K--LCMGLCINTPGSYQCSCPRGYILAADMNTCRDVDECATDSINQVCTGRNDICTNIRGSYKCT 771
            .  ||...|:|.||.:.|.||.||.|... ..|:||:||.|.|  ..| |...:|.||.|.::|.
Zfish   247 SSILCQYQCVNEPGKFSCVCPEGYELLGS-RLCQDVNECETGS--HQC-GEGQVCVNIHGGHQCV 307

  Fly   772 TVN-CPLGYSIDPEQKNRCRQNLNFCE--GEECYTQPSAFTYNFITFVSKLMIPPDGRTIFTLRG 833
            :.| |...|.  ...:|||     .|.  ..||...|.:..:.:::..|:..:|.|         
Zfish   308 SANRCQEPYI--QVSENRC-----ICPVVKPECRDLPFSIVHRYMSITSERSVPSD--------- 356

  Fly   834 PLWYDNIEFDLKIVRIQATTNIQKATDGSFDTLQ---------------NNNQVNVILKKSLEGP 883
                        |.:||||:    ...|::::.:               ||....::|.:::.||
Zfish   357 ------------IFQIQATS----VYPGAYNSFRIRSGDQNEEFYIRQINNISAMLVLARTVTGP 405

  Fly   884 QDIELELSMTVYTNGMP-RGKSVAKLFLFVSQHTF 917
            ::..|:|.|......|. :..||.:|.:::..|.|
Zfish   406 KEYVLDLEMQSVNPLMNYQTSSVLRLAVYIGPHVF 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31999NP_001284712.1 vWFA <189..227 CDD:294047
EGF_CA 251..293 CDD:238011
EGF_CA 328..>363 CDD:214542
EGF_CA 519..564 CDD:214542 10/45 (22%)
EGF_CA 565..601 CDD:238011 16/35 (46%)
EGF_CA 611..651 CDD:284955 15/39 (38%)
vWFA <655..695 CDD:294047 19/40 (48%)
cEGF 678..701 CDD:289433 12/22 (55%)
EGF_CA 698..>730 CDD:214542 15/33 (45%)
cEGF 721..744 CDD:289433 9/22 (41%)
efemp2bNP_001153830.1 EGF_CA 120..153 CDD:214542 16/32 (50%)
EGF_CA 161..190 CDD:214542 12/32 (38%)
cEGF 180..203 CDD:315355 11/25 (44%)
vWFA <195..235 CDD:320736 19/42 (45%)
vWFA <238..273 CDD:320736 19/38 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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