DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31999 and Matn4

DIOPT Version :9

Sequence 1:NP_001284712.1 Gene:CG31999 / 43777 FlyBaseID:FBgn0051999 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_001100009.1 Gene:Matn4 / 296358 RGDID:1309732 Length:624 Species:Rattus norvegicus


Alignment Length:382 Identity:86/382 - (22%)
Similarity:134/382 - (35%) Gaps:119/382 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   530 GNHERCINTNGHFRCESLLQCSPGYKSTVDGKSCIDIDECDTGEHNCGERQICRNRNGGFVCSCP 594
            |....|:|..|.|.|    .|:.|||...|.::|:.||.|..|.|.|                  
  Rat   227 GCQHLCVNAPGTFYC----ACNSGYKLAPDNRN
CLAIDLCAEGTHGC------------------ 269

  Fly   595 IGHELKRSIGGASTCVDTNECALEQRVCPLNAQCFNTIGAYYCECKAGFQKKSDGNNSTQCFDID 659
                                          ...|.:::.:|:|.|:|||..:.|   ...|..||
  Rat   270 ------------------------------EHLCVSSVDSYFCRCRAGFALQQD---QRSC
RAID 301

  Fly   660 ECQVIPGLCQQKCLNFWGGYRCTCNSGYQLGPDNRT------CNDINE-CEVHKDYKLCMGLCIN 717
            .|......||.:|::...|.:|.|..|:.|.||.|:      ||.::. ||..         |::
  Rat   302 YCSFGNHSCQHECVSTLVGPQCRCREGHDLLPDGRSCQVRDFCNGVDHGCEFQ---------CVS 357

  Fly   718 TPGSYQCSCPRGYILAADMNTCRDVDECATDSINQVCTGRNDICTNIRGSYKCTTVNCPLGYSID 782
            ...|:.|.||.|..|.||..:|   |.|.        .|..|:...:.||           .|:.
  Rat   358 EGLSFHCLCPEGRRLQADGKSC---DRCR--------EGHVDLVLLVDGS-----------KSVR 400

  Fly   783 PEQ----KNRCRQNLNFCEGEECYTQPSAFTYNFITFVSKLMIPPDGRTIFTLRGPLWYDNIEFD 843
            |:.    |....|.::|.:     ..|.......:.|.|::      ||.|    ||.......:
  Rat   401 PQNFELVKRFVNQIVDFLD-----VSPEGTRVGLVQFSSRV------RTEF----PLGRYGTAAE 450

  Fly   844 LKIVRIQATTNIQKATDGSFDTLQNNNQVNVILKKSLEG--PQDIELELSMTVYTNG 898
            :|    ||...::....|:...|...:.|.....: ::|  |:|:.:.....|:|:|
  Rat   451 VK----QAVLAVEYMERGTMTGLALRHMVEHSFSE-VQGARPRDLNVPRVGLVFTDG 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31999NP_001284712.1 vWFA <189..227 CDD:294047
EGF_CA 251..293 CDD:238011
EGF_CA 328..>363 CDD:214542
EGF_CA 519..564 CDD:214542 11/33 (33%)
EGF_CA 565..601 CDD:238011 6/35 (17%)
EGF_CA 611..651 CDD:284955 8/39 (21%)
vWFA <655..695 CDD:294047 14/39 (36%)
cEGF 678..701 CDD:289433 10/28 (36%)
EGF_CA 698..>730 CDD:214542 7/32 (22%)
cEGF 721..744 CDD:289433 9/22 (41%)
Matn4NP_001100009.1 vWA_Matrilin 33..255 CDD:238752 11/31 (35%)
FXa_inhibition 262..297 CDD:291342 12/85 (14%)
FXa_inhibition 303..338 CDD:291342 12/34 (35%)
FXa_inhibition 344..379 CDD:291342 13/43 (30%)
vWFA 385..621 CDD:294047 29/149 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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