DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31999 and Jag2

DIOPT Version :9

Sequence 1:NP_001284712.1 Gene:CG31999 / 43777 FlyBaseID:FBgn0051999 Length:917 Species:Drosophila melanogaster
Sequence 2:XP_038967750.1 Gene:Jag2 / 29147 RGDID:2938 Length:1247 Species:Rattus norvegicus


Alignment Length:983 Identity:217/983 - (22%)
Similarity:330/983 - (33%) Gaps:349/983 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LWLGLCHSTLEVCCSRELDHQDCELGRL-----AALDGTRCDGEGNVTSSSYATCCR-SCQIGLA 119
            |.|.||     |..:|.:.:.:.:|..|     ..|.|..|||:|..|.:  ..|.| .|...:.
  Rat    15 LLLVLC-----VQATRPMGYFELQLSALRNVNGELLSGACCDGDGRTTRA--GGCGRDECDTYVR 72

  Fly   120 VKASKANCKDPLFSFIFLIESYRA-------CCY--------GSADFKDQPGIDEIDKANSITDE 169
            |      |          ::.|:|       |.|        |...|...|.....|:|.:.:..
  Rat    73 V------C----------LKEYQAKVTPTGPCSYGYGATPVLGGNSFYLPPAGAAGDRARARSRT 121

  Fly   170 G--------ELPFVSEEDMNVTIVL---------TGDDDICGKIENL------------------ 199
            |        .:||......:.|:::         |.|:::.  ||.:                  
  Rat   122 GGHQDPGLVVIPFQFAWPRSFTLIVEAWDWDNDTTPDEELL--IERVSHAGMINPEDRWKSLHFS 184

  Fly   200 --CAHI-------CENTFDAYQCK--CHP------GFMLDN-NNVTC------SPMKTQICPSGY 240
              .||:       |:..:.:..|.  |.|      .:..|. .|..|      ...|..:|..|.
  Rat   185 GHVAHLELQIRVRCDENYYSATCNKFCRPRNDFFGHYTCDQYGNKACMDGWMGKECKEAVCKQGC 249

  Fly   241 NLDKLDNKCIDIDECR-------------------------EDLH-DC----------KSSQYC- 268
            ||  |...|....|||                         |..| ||          |...|| 
  Rat   250 NL--LHGGCTVPGECRCSYGWQGKFCDECVPYPGCVHGSCVEPWHCDCETNWGGLLCDKDLNYCG 312

  Fly   269 -HN--TNGGYHCLNVKEKE----CPPGFHYDHDYDAC-KDDYKCKDRKCVKIQSCDK---GFSLH 322
             |:  .||| .|:|.:..:    ||.|:...:    | :.::.|....|....||.:   ||..|
  Rat   313 SHHPCVNGG-TCINAEPDQYLCACPDGYLGKN----CERAEHACASNPCANGGSCHEVLSGFECH 372

  Fly   323 ------NGTCS-DIDECSHKSL-----------------------NNCHVNSNQ----------E 347
                  ..||: |||||:....                       ..|.:::|:          .
  Rat   373 CPSGWSGPTCALDIDECASNPCAAGGTCVDQVDGFECICPEQWVGATCQLDANECEGKPCLNAFS 437

  Fly   348 CVNTVGSYSCNCLPGFNLDATLNKCVDINECSINNHNCLPTQRCDNTIGSYICTRLQSCGTGYTL 412
            |.|.:|.|.|:||||:.   ..|..::||:|   :..|.....|.:.:..|.|.    |..|:  
  Rat   438 CKNLIGGYYCDCLPGWK---GANCHININDC---HGQCQHGGTCKDLVNGYQCV----CPRGF-- 490

  Fly   413 NAETGNCDDDDECTLSTHNCPSN-----YDCHNTRGSFRCY--RKISTMLTTRTTSTTVPPLSLE 470
                    ....|.|..:.|.|:     ..|.:....|||:  |.:|..|.........|...| 
  Rat   491 --------GGRHCELEYYKCASSPCRRGGICEDLVDGFRCHCPRGLSGPLCEVDVDLCEPNPCL- 546

  Fly   471 NARRSFTSRYPYPLAVHPEYSQNNDSISTNRRVDCSPGFYRNTLGACIDTNEC-----------M 524
            |..|.:.....|..|...::...|.|:.   |..| ||      |||...:.|           .
  Rat   547 NGARCYNLEDDYYCACPEDFGGKNCSVP---RETC-PG------GACRVIDGCGFEAGSRAHGAA 601

  Fly   525 EQNPCGNHERCIN-TNGHFRCESLLQCSPGYKSTVDGKSCID-IDECDTGEHNCGERQICRNRNG 587
            ....||.|..|:: ..|:|.|    .|..|:..|.    |.: ||:|        ..|.|  |||
  Rat   602 PSGVCGPHGHCVSLPGGNFSC----ICDSGFTGTY----CHENIDDC--------MGQPC--RNG 648

  Fly   588 G--------FVCSCPIGHELKRSIGGASTCVDTNECALEQRVCPLNAQCFNTIGAYYCECKAGFQ 644
            |        |.|.||.|.|      |....::.|:|..:.  |....:|::.:..:||.|..|::
  Rat   649 GTCIDEVDSFRCFCPSGWE------GELCDINPNDCLPDP--CHSRGRCYDLVNDFYCVCDDGWK 705

  Fly   645 KKS--------DG---NNSTQCFDIDE---CQVIPG----LC---------QQKCLNFWGG---- 678
            .|:        |.   :|...|:|..:   |...||    .|         ...|:|  ||    
  Rat   706 GKTCHSREFQCDAYTCSNGGTCYDSGDTFRCACPPGWKGSTCTIAKNSSCVPNPCVN--GGTCVG 768

  Fly   679 ----YRCTCNSGYQLGPDNRTC-NDINECEVHKDYKLCMGLCINTPGSYQCSCPRGYILAADMNT 738
                :.|.|..|:    :.||| ::.|:|.....|.  .|:|::....::|.|..|: ...|   
  Rat   769 SGDSFSCICRDGW----EGRTCTHNTNDCNPLPCYN--GGICVDGVNWFRCECAPGF-AGPD--- 823

  Fly   739 CR-DVDECATDSINQVCTGRNDICTNIRGSYKCTTVNCPLGYSIDPEQKNRCRQNLNFCEGEECY 802
            || ::|||.:.......|     |.:....|:|   :||.|.| .|    ||::.:.|.  ..|:
  Rat   824 CRINIDECQSSPCAYGAT-----CVDEINGYRC---SCPPGRS-GP----RCQEVVIFT--RPCW 873

  Fly   803 TQPSAFTY 810
            ::..:|.:
  Rat   874 SRGVSFPH 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31999NP_001284712.1 vWFA <189..227 CDD:294047 11/73 (15%)
EGF_CA 251..293 CDD:238011 19/85 (22%)
EGF_CA 328..>363 CDD:214542 15/67 (22%)
EGF_CA 519..564 CDD:214542 11/56 (20%)
EGF_CA 565..601 CDD:238011 15/44 (34%)
EGF_CA 611..651 CDD:284955 10/50 (20%)
vWFA <655..695 CDD:294047 13/63 (21%)
cEGF 678..701 CDD:289433 7/31 (23%)
EGF_CA 698..>730 CDD:214542 7/31 (23%)
cEGF 721..744 CDD:289433 6/23 (26%)
Jag2XP_038967750.1 MNNL 28..103 CDD:400141 19/92 (21%)
DSL 178..240 CDD:396134 9/61 (15%)
EGF_CA 307..345 CDD:238011 11/42 (26%)
EGF 351..381 CDD:394967 7/29 (24%)
EGF_CA 385..421 CDD:238011 5/35 (14%)
EGF_CA 423..458 CDD:238011 10/37 (27%)
EGF_CA 461..496 CDD:238011 9/51 (18%)
EGF_CA 502..534 CDD:238011 9/31 (29%)
EGF_CA 536..571 CDD:238011 6/35 (17%)
EGF_CA 636..671 CDD:238011 16/50 (32%)
EGF_CA 676..709 CDD:238011 9/34 (26%)
EGF 716..746 CDD:394967 7/29 (24%)
EGF_CA 757..787 CDD:238011 9/35 (26%)
EGF_CA <797..824 CDD:238011 7/32 (22%)
EGF_CA 827..863 CDD:238011 13/48 (27%)
VWC_out 872..943 CDD:214565 2/10 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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