DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31999 and Efemp1

DIOPT Version :9

Sequence 1:NP_001284712.1 Gene:CG31999 / 43777 FlyBaseID:FBgn0051999 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_666127.2 Gene:Efemp1 / 216616 MGIID:1339998 Length:493 Species:Mus musculus


Alignment Length:543 Identity:159/543 - (29%)
Similarity:232/543 - (42%) Gaps:109/543 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   406 CGTGYTLNAETGNCDDDDECTLSTHNCPSNYDCHNTRGSFRCYRKISTMLTTR------------ 458
            |..||..:.....|.|.|||.:....|.....|.|..|.:.|..|.:.::...            
Mouse    29 CTDGYEWDPIRQQCKDIDECDIVPDACKGGMKCVNHYGGYLCLPKTAQIIVNNEHPQQETPAAEA 93

  Fly   459 ----TTSTTVPPLSLENARRSFTSRYPYP---------LAVHPEYSQNNDSISTNRRVDCSPGFY 510
                ||.|.        |.||..:....|         ....||       :.|.|         
Mouse    94 SSGATTGTV--------AARSMATSGVVPGGGFMASATAVAGPE-------VQTGR--------- 134

  Fly   511 RNTLGACIDTNECMEQNPCGNHERCINTNGHFRCESLLQCSPGYKSTVDGKSCIDIDECDTGEHN 575
                     .|..:.:|| .:.:|..:...|     .:||:.||:.: :...|.|||||.:|.||
Mouse   135 ---------NNFVIRRNP-ADPQRIPSNPSH-----RIQCAAGYEQS-EHNVCQDIDECTSGTHN 183

  Fly   576 CGERQICRNRNGGFVCSCPIGHELKRSIGGASTCVDTNECALEQRVCPLNAQCFNTIGAYYCECK 640
            |...|:|.|..|.|.|.|..|:: ||    ...|||.:||.:.. .|  :.:|.||.|::||:|.
Mouse   184 CRTDQVCINLRGSFTCQCLPGYQ-KR----GEQCVDIDECTVPP-YC--HQRCVNTPGSFYCQCS 240

  Fly   641 AGFQKKSDGNNSTQCFDIDECQVIPGLCQQKCLNFWGGYRCTCNSGYQLGPDNRTCNDINECEVH 705
            .|||..:  ||.| |.||:||.. ...|.|:|.|..|.:.|.||.||:|..|...|.||:||.. 
Mouse   241 PGFQLAA--NNYT-CVDINECDA-SNQCAQQCYNILGSFICQCNQGYELSSDRLNCEDIDECRT- 300

  Fly   706 KDYKLCMGLCINTPGSYQCSCPRGYILAADMNTCRDVDECATDSINQVCTGRNDICTNIRGSYKC 770
            ..| ||...|:|.||.:.|.||:||.:... .||:|::||.|   ...|. .:::|.|..|.::|
Mouse   301 SSY-LCQYQCVNEPGKFSCMCPQGYEVVRS-RTCQDINECET---TNECR-EDEMCWNYHGGFRC 359

  Fly   771 TTVN-CPLGYSIDPEQKNRCRQNLNFC--EGEECYTQPSAFTYNFITFVSKLMIPPDGRTIFTLR 832
            ...| |...|.:..|  |||     .|  ....|...|.:..|.:::..|...:|.|   ||.::
Mouse   360 YPRNPCQDHYVLTSE--NRC-----VCPVSNTMCRELPQSIVYKYMSIRSDRSVPSD---IFQIQ 414

  Fly   833 GPLWYDNIEFDLKIVRIQATTNIQKATDGSFDTLQNNNQVN--VILKKSLEGPQDIELELSM-TV 894
            ..:.|.|   .:...||::...     :|.| .|:..:.|:  ::|.|||.||::..::|.| ||
Mouse   415 ATMIYAN---TINTFRIKSGNE-----NGEF-YLRQTSPVSAMLVLVKSLSGPREYIVDLEMLTV 470

  Fly   895 YTNGMPRGKSVAKLFLFVSQHTF 917
            .:.|..|..||.:|.:.|...:|
Mouse   471 SSIGTFRTSSVLRLTIIVGPFSF 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31999NP_001284712.1 vWFA <189..227 CDD:294047
EGF_CA 251..293 CDD:238011
EGF_CA 328..>363 CDD:214542
EGF_CA 519..564 CDD:214542 9/44 (20%)
EGF_CA 565..601 CDD:238011 17/35 (49%)
EGF_CA 611..651 CDD:284955 14/39 (36%)
vWFA <655..695 CDD:294047 17/39 (44%)
cEGF 678..701 CDD:289433 10/22 (45%)
EGF_CA 698..>730 CDD:214542 14/31 (45%)
cEGF 721..744 CDD:289433 8/22 (36%)
Efemp1NP_666127.2 EGF_CA 173..>206 CDD:311536 17/32 (53%)
EGF_CA 214..244 CDD:214542 12/32 (38%)
cEGF 234..257 CDD:372248 12/25 (48%)
Mediates interaction with TIMP3. /evidence=ECO:0000250 259..493 80/260 (31%)
cEGF 274..297 CDD:372248 10/22 (45%)
EGF_CA 294..333 CDD:214542 17/41 (41%)
EGF_CA 334..>359 CDD:214542 8/28 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11163
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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