DRSC/TRiP Functional Genomics Resources

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Protein Alignment Crk and crk

DIOPT Version :9

Sequence 1:NP_651908.1 Gene:Crk / 43775 FlyBaseID:FBgn0024811 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001006107.1 Gene:crk / 448023 XenbaseID:XB-GENE-996357 Length:296 Species:Xenopus tropicalis


Alignment Length:295 Identity:139/295 - (47%)
Similarity:177/295 - (60%) Gaps:51/295 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDVSDRNSWYFGPMSRQDATEVLMNERERGVFLVRDSNSIAGDYVLCVREDTKVSNYIINKVQQQ 68
            ||..||.|||:|.::||:|..:|..:| .||||||||.:|.|||||.|.|::|||:||||.|...
 Frog     5 FDSEDRASWYWGKLNRQEAVNLLQGQR-HGVFLVRDSTTIPGDYVLSVSENSKVSHYIINSVSNN 68

  Fly    69 D-------QIVYRIGDQSFDNLPKLLTFYTLHYLDTTPLKRPACR-----------RVEKVIGKF 115
            .       |..:|||||.||:||.||.||.:||||||.|..|..:           .||.|...|
 Frog    69 RQSGTGMIQSRFRIGDQEFDSLPSLLEFYKIHYLDTTTLIEPVSKSKQSGVIQRQEEVEYVRALF 133

  Fly   116 DFVGSDQDDLPFQRGEVLTIVRKDEDQWWTARNSSGKIGQIPVPYIQQYDDYMDEDAIDKNEPSI 180
            ||.|:|.:||||::|::|.|..|.|:|||.|.::.|:.|.|||||:::|           ..||.
 Frog   134 DFNGNDDEDLPFKKGDILRIRDKPEEQWWNAEDNDGRRGMIPVPYVEKY-----------RPPSS 187

  Fly   181 SGSS-------NVFESTL--------KRTDLNRKL------PAYARVKQSRVPNAYDKTALKLEI 224
            :||:       |.....|        .:..:|..|      |.:|||.|.|||||||||||.||:
 Frog   188 AGSALIGGNQENSHPQPLGGPEPGPYAQPSVNTPLPNLQNGPIFARVIQKRVPNAYDKTALALEV 252

  Fly   225 GDIIKVTKTNINGQWEGELNGKNGHFPFTHVEFVD 259
            ||::||||.|::||||||.|||.||||||||..:|
 Frog   253 GDLVKVTKINVSGQWEGECNGKYGHFPFTHVRLLD 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CrkNP_651908.1 SH2_CRK_like 4..108 CDD:198180 59/121 (49%)
SH3_CRK_N 109..163 CDD:212692 27/53 (51%)
SH3_CRK_C 201..257 CDD:212693 42/55 (76%)
crkNP_001006107.1 SH2_CRK_like 5..115 CDD:198180 59/110 (54%)
SH3_CRK_N 127..181 CDD:212692 27/53 (51%)
SH3_CRK_C 229..285 CDD:212693 42/55 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 93 1.000 Domainoid score I7441
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H81850
Inparanoid 1 1.050 252 1.000 Inparanoid score I3131
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1414461at2759
OrthoFinder 1 1.000 - - FOG0003539
OrthoInspector 1 1.000 - - otm47556
Panther 1 1.100 - - O PTHR19969
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2415
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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