Protein Alignment Abcd1 and ABCD2

DIOPT Version :10

• Sequence 1: NP_651906.1
• Gene: Abcd1 / 43772
• FlyBaseID: FBgn0039890
• Length: 730
• Species: Drosophila melanogaster
• Sequence 2: NP_175837.2
• Gene: ABCD2 / 841876
• AraportID: AT1G54350
• Length: 706
• Species: Arabidopsis thaliana
• Alignment Length: 774
• Identity: 192/774 - (24%)
• Similarity: 317/774 - (40%)
• Gaps: 159/774 - (20%)

  Fly    34 ILALTIKVTIPYVKNVNTTSSVRTQKGKTNGQLSPSTRDSSEEDFKLAEAEKLLVAQQLKKKATN 98
            ||.:|..|..|::. :..:|.:|.:....|.....:.|      |:......||....::....:
plant     2 ILMITAPVCPPHLL-LRHSSLLRHESSIGNFHRKKNPR------FRTVSCSSLLPQPSVRPDKAS 59

  Fly    99 NLVEPGLNKEFLKHLQMLAKIMIPQAFCY---ETGLLSVHTFCL-ISRTFLSIYVAALEGALVKF 159
            .|  ..|.|:|.       |:..|..|..   :..|.....|.| ::.|.:|:....|.......
plant    60 EL--KTLWKKFY-------KVASPYWFSEDKDQARLRLAAVFALTLATTGISVGFNFLGRDFYNS 115

  Fly   160 IVRKDIKQFALVLLKW---FGIAIPATFVNSMIRFLESKLSLAFRTRLVRHSYRLYFKNQNYYRV 221
            :..||.:||...|..:   |...||...:..   :.:..|||.:|:.:.::..:.|.|:|.:|::
plant   116 LANKDQEQFTKQLFYYLCAFAGGIPFFVLRD---YTKETLSLRWRSWMTKYYLQRYLKDQTFYKI 177

  Fly   222 SNLDGRIENADHRLTEDISVFANSVAHLYSSLTKPCFDLMLIGLALMRSSKKMKANII--TGPAL 284
            .: ...|:|.|.||.:|:|.|..:......:|.....||:..            :||:  ..|.|
plant   178 QS-QSIIDNPDQRLVDDLSSFTGTALSFSLTLVNATIDLISF------------SNILFTIYPPL 229

  Fly   285 -------SIGVIALTAHILR-IVSPKFGQLVSEEANRYGYLRHIHSRIITNAEEIAFYGGHKVEM 341
                   |.|..|::..:.: :|:..|.|...|...||..:     |:..|||.||||||.:.||
plant   230 FLVLLLYSFGGTAISVFLGKGLVNLNFLQEKKEADFRYSLV-----RVRENAESIAFYGGEQNEM 289

  Fly   342 QQLRQAYNRLVNQMTTIFNQKLWFIMLEQFFMKYVWSGTGMIMVSLPILT------GSDVGLGTV 400
            |.|.|.:....:.:|.        :::....:::...|...::..||:..      ...:..|.:
plant   290 QLLLQRFRSAFDNLTE--------LLIASRNLEFFTDGYRYLIQILPVAVVAPMYFSGKIEFGVI 346

  Fly   401 PNTAISESRVSERTQYLTTARNLLISAADAIERLMSSYKEIVSLAG--------YTFRVAGMMDV 457
             |.::|      ...::....:|::....||    ||:..::...|        ..||  ...|.
plant   347 -NQSVS------AFNHILGDFSLVVYQFQAI----SSFSAVIDRLGEFDDLLDNNIFR--DPSDT 398

  Fly   458 FEETALGVYCKTSVMESNQS----NGIIEFRNGKPIAKGRIIYSDDPKNMSISLRAVPVVTP-NC 517
            .:|..|     |...|.|.|    ||.|:               ..|....:.:..:.:.|| |.
plant   399 VDEIEL-----TYQSEMNSSLLDTNGSIK---------------SQPNQKRLEIEELTLQTPTNG 443

  Fly   518 DIVVPKLTLCIEPGVHLLITGPNGCGKSSLFRILSGLWPIYAG--------ELHIPRPVKDVP-- 572
            ..:|..|:..:....||||.||:|.||:||.|.::|||....|        |:...:...|..
plant   444 TTLVHNLSADVYDKDHLLIMGPSGSGKTSLLRAMAGLWRSGKGKITFYLDPEVDFTQEKSDTQEN 508

  Fly   573 -----CMFYIPQRPYMSIGSLCDQIIYPD----------------------TREDMKRKHITENE 610
                 .:.::||||||.:|||..|::||.                      .|||...|..|::.
plant   509 SGKRGDVLFLPQRPYMVLGSLRQQLLYPTWSATVEETTPGGSNIDGSPPLLIREDGNEKPTTDDL 573

  Fly   611 LRSILKMVSLEHIAQR-DSFDVVRDWKDILSGGEKQRMAIARLFYHRPRYALLDECTSAVSIDVE 674
            :|: |:.|.|.|||.| ...|.:.:|..:||.||:||:|.|||...:|:.|||||.|||:....|
plant   574 MRT-LEKVCLGHIADRFGGLDSIHEWSSVLSLGEQQRLAFARLLLSQPKLALLDESTSALDEANE 637

  Fly   675 SSIYEIAKGMGITLLTITHRPTLWKYHTHILEFDGLG------NWQFRKMNSDEEQKGQ 727
            :.:|:..:..|||.::|.||.||.|:|..||:.....      ||:...:::.:...|:
plant   638 AFLYQQIQSAGITYISIGHRRTLTKFHNKILQISTADPKSNERNWRIEDVDAQDSLYGR 696

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abcd1	NP_651906.1	3a01203	75..715	CDD:273360	182/719 (25%)
ABCD2	NP_175837.2	YddA	62..671	CDD:443337	176/678 (26%)