Sequence 1: | NP_001245409.1 | Gene: | ABCD / 43772 | FlyBaseID: | FBgn0039890 | Length: | 730 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001256607.1 | Gene: | pmp-3 / 179968 | WormBaseID: | WBGene00004060 | Length: | 688 | Species: | Caenorhabditis elegans |
Alignment Length: | 741 | Identity: | 185/741 - (24%) |
---|---|---|---|
Similarity: | 314/741 - (42%) | Gaps: | 158/741 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 55 VRTQKGKTNGQLSPSTRDSSEEDFKLAEAEKLLVAQQLKKKATNNLVEPGLNKEFLKHLQMLAKI 119
Fly 120 MIPQAFCYETGLLSVHTFCLISRTFLS---IYVAALEGALVKFIV---RKDIKQFALVLLKWFGI 178
Fly 179 AIPATFVNSMIRFLESKLSLAFRTRLVRHSYRLYFKNQNYYRVSNLDGRIENADHRLTEDIS--- 240
Fly 241 -VFANSVAHLYSSLTKPCFDLMLIGLALMRSSKKMKANIITGPALSIGVIALTAHILRIVSPKFG 304
Fly 305 QLVSEEANRYGYLRHIHSRIITNAEEIAFYGG-------------HKVEMQQLRQAYNRLVNQMT 356
Fly 357 TIFNQKLWFIMLEQFFMKYVWSGTGMIMVSLPILTG---SDVGLGTVPNTAISESRVSERTQYLT 418
Fly 419 TARNLLISAADAIERLMSSYKEIVSLAGYTFRVAGMMDVFEE-TALGVYC-KTSVMESNQSNGII 481
Fly 482 ------------------------------EFRNGKPIAKGRIIYSDD--PKNMSISLRAVPVVT 514
Fly 515 PN--CDIVVPKLTLCIEPGVHLLITGPNGCGKSSLFRILSGLWPIYAGEL--HIPRPVKDVPCMF 575
Fly 576 YIPQRPYMSIG--SLCDQIIYP----DTREDMKRKHITENELRSILKMVSLEHIAQR----DSFD 630
Fly 631 VVRDWKDILSGGEKQRMAIARLFYHRPRYALLDECTSAVSIDVESSIYEIAKGMGITLLTITHRP 695
Fly 696 TLWKYHTHILEFDG-LGNWQFRKMNS 720 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCD | NP_001245409.1 | 3a01203 | 75..715 | CDD:273360 | 178/714 (25%) |
pmp-3 | NP_001256607.1 | ABC_membrane_2 | 34..314 | CDD:284003 | 66/307 (21%) |
YddA | 37..655 | CDD:226646 | 172/672 (26%) | ||
ABCD_peroxisomal_ALDP | 450..662 | CDD:213190 | 82/222 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D146647at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000393 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100236 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X313 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.820 |