Sequence 1: | NP_001245409.1 | Gene: | ABCD / 43772 | FlyBaseID: | FBgn0039890 | Length: | 730 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_031461.1 | Gene: | Abcd1 / 11666 | MGIID: | 1349215 | Length: | 736 | Species: | Mus musculus |
Alignment Length: | 719 | Identity: | 345/719 - (47%) |
---|---|---|---|
Similarity: | 475/719 - (66%) | Gaps: | 62/719 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 TSAILALT---IKVTIPYVKNVNTTSSVRTQKGKTNGQLSPSTRDSSEEDFKLAEAEKLLVAQQL 92
Fly 93 KKKATNNLVEPGLNKEFLKHLQMLAKIMIPQAFCYETGLLSVHTFCLISRTFLSIYVAALEGALV 157
Fly 158 KFIVRKDIKQFALVLLKWFGIAIPATFVNSMIRFLESKLSLAFRTRLVRHSYRLYFKNQNYYRVS 222
Fly 223 NLDGRIENADHRLTEDISVFANSVAHLYSSLTKPCFDLMLIGLALMRSSKKMKANIITGPALSIG 287
Fly 288 VIALTAHILRIVSPKFGQLVSEEANRYGYLRHIHSRIITNAEEIAFYGGHKVEMQQLRQAYNRLV 352
Fly 353 NQMTTIFNQKLWFIMLEQFFMKYVWSGTGMIMVSLPILTGSDVGLGTVPNTAI--------SESR 409
Fly 410 VSERTQYLTTARNLLISAADAIERLMSSYKEIVSLAGYTFRVAGMMDVFEETALGVYCKTSVMES 474
Fly 475 NQSNGIIEFRNGKPI-----AKGRIIYSDDPKNMSISLRAVPVVTPNCDIVVPKLTLCIEPGVHL 534
Fly 535 LITGPNGCGKSSLFRILSGLWPIYAGELHIPRPVKDVPCMFYIPQRPYMSIGSLCDQIIYPDTRE 599
Fly 600 DMKRKHITENELRSILKMVSLEHIAQRD-SFDVVRDWKDILSGGEKQRMAIARLFYHRPRYALLD 663
Fly 664 ECTSAVSIDVESSIYEIAKGMGITLLTITHRPTLWKYHTHILEFDGLGNWQFRKMNS-------D 721
Fly 722 EEQK 725 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCD | NP_001245409.1 | 3a01203 | 75..715 | CDD:273360 | 330/653 (51%) |
Abcd1 | NP_031461.1 | 3a01203 | 1..681 | CDD:273360 | 340/700 (49%) |
Interaction with PEX19. /evidence=ECO:0000250|UniProtKB:P33897 | 67..186 | 65/118 (55%) | |||
PEX19 binding site and required for peroxisomal targeting. /evidence=ECO:0000250|UniProtKB:P33897 | 67..84 | 5/16 (31%) | |||
ABC_membrane_2 | 83..352 | CDD:284003 | 145/268 (54%) | ||
ABCD_peroxisomal_ALDP | 474..679 | CDD:213190 | 132/208 (63%) | ||
Required for homodimerization. /evidence=ECO:0000250|UniProtKB:P33897 | 658..736 | 22/41 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167848686 | |
Domainoid | 1 | 1.000 | 317 | 1.000 | Domainoid score | I1264 |
eggNOG | 1 | 0.900 | - | - | E1_COG4178 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 678 | 1.000 | Inparanoid score | I717 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53776 | |
OrthoDB | 1 | 1.010 | - | - | D146647at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000393 | |
OrthoInspector | 1 | 1.000 | - | - | otm43311 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100236 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR11384 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X313 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.770 |