DRSC/TRiP Functional Genomics Resources

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Protein Alignment ABCD and LOC100537809

DIOPT Version :9

Sequence 1:NP_001245409.1 Gene:ABCD / 43772 FlyBaseID:FBgn0039890 Length:730 Species:Drosophila melanogaster
Sequence 2:XP_003200166.3 Gene:LOC100537809 / 100537809 -ID:- Length:744 Species:Danio rerio


Alignment Length:714 Identity:365/714 - (51%)
Similarity:484/714 - (67%) Gaps:45/714 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 TSAILALTIKVTIPYVKNVNTTSSVRTQKGKTNGQLSPSTRDSSEEDFKLAEAEKLLVAQQLKKK 95
            |:|..||.:.......|.:......:.|:.||:...:|:   :..|:..||       ..:...:
Zfish    17 TAAKRALFLAAAAYGAKTLYPILCRQLQQRKTSRNHTPA---AGHENGSLA-------IHKAPPE 71

  Fly    96 ATNNLVEPGLNKEFLKHLQMLAKIMIPQAFCYETGLLSVHTFCLISRTFLSIYVAALEGALVKFI 160
            ..:.:..||::.||.|.:..|.||:.|:....|.|||.:|:..|:||||||||||.|:|.:||.|
Zfish    72 TLSTVKSPGVDAEFFKQILALVKIVFPRFITKELGLLCLHSVALVSRTFLSIYVAGLDGKIVKTI 136

  Fly   161 VRKDIKQFALVLLKWFGIAIPATFVNSMIRFLESKLSLAFRTRLVRHSYRLYFKNQNYYRVSNLD 225
            |.|..:.|.:.|:||..||||||||||.||:||.||:||||||||.|:|:.||.:|.||:|||:|
Zfish   137 VEKQPRSFMIKLMKWLLIAIPATFVNSAIRYLECKLALAFRTRLVDHAYKTYFTDQTYYKVSNMD 201

  Fly   226 GRIENADHRLTEDISVFANSVAHLYSSLTKPCFDLMLIGLALMRSSKKMKANIITGPALSIG-VI 289
            ||:.|.|..||||:.:|:.|:|||||:||||..|::|....|:::::...|| .:||.|..| |:
Zfish   202 GRLANPDQSLTEDVMMFSQSIAHLYSNLTKPILDVILTSYTLIQTARSRGAN-ASGPTLLAGLVV 265

  Fly   290 ALTAHILRIVSPKFGQLVSEEANRYGYLRHIHSRIITNAEEIAFYGGHKVEMQQLRQAYNRLVNQ 354
            ..||.:||..||:||:||:|||:|.||||::|||||.||||||||.||||||:||::.|:.|..|
Zfish   266 FATAKVLRACSPRFGKLVAEEAHRKGYLRYVHSRIIANAEEIAFYRGHKVEMKQLQKCYSALAEQ 330

  Fly   355 MTTIFNQKLWFIMLEQFFMKYVWSGTGMIMVSLPILTGSDVGLGTVPNTAI---SESRVSERTQY 416
            |..|.:::||:||:|||.|||||||:|::||::||:|.:    |...|...   ::..|||||:.
Zfish   331 MNLILSKRLWYIMIEQFLMKYVWSGSGLVMVAVPIITAT----GFADNELADGQTQVLVSERTEA 391

  Fly   417 LTTARNLLISAADAIERLMSSYKEIVSLAGYTFRVAGMMDVFEETALGVY------CKTSVMES- 474
            .|||||||.|.||||||:||||||:..|||||.||..|..||:|...|:|      |.|..|.| 
Zfish   392 FTTARNLLASGADAIERIMSSYKEVTELAGYTARVHNMFLVFDEVQRGLYKRSSAACSTGEMISG 456

  Fly   475 NQSNGIIEFRNGKPIAKGRIIYSDDPKNMSISLRAVPVVTPNCDIVVPKLTLCIEPGVHLLITGP 539
            :|:...|:   |....||::|..|    ..|....||::|||.|:||..|...:|.|:|||||||
Zfish   457 DQAEMHID---GPRQIKGKVIDVD----KGIVCEQVPIITPNGDVVVSCLNFKVEEGMHLLITGP 514

  Fly   540 NGCGKSSLFRILSGLWPIYAGELHIPRPVKDVPCMFYIPQRPYMSIGSLCDQIIYPDTREDMKRK 604
            |||||||||||||||||:|.|.||.|.|..    |||||||||||||:|.||:||||:.:||..|
Zfish   515 NGCGKSSLFRILSGLWPVYGGLLHKPSPEH----MFYIPQRPYMSIGTLRDQVIYPDSLDDMHSK 575

  Fly   605 HITENELRSILKMVSLEHIAQRD-SFDVVRDWKDILSGGEKQRMAIARLFYHRPRYALLDECTSA 668
            ...:.||..||.:|:|.||..|: .:|...||||:|||||||||.:||:|||:|:||||||||||
Zfish   576 GYRDKELEVILDIVNLNHIVTREGGWDAEMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSA 640

  Fly   669 VSIDVESSIYEIAKGMGITLLTITHRPTLWKYHTHILEFDGLGNWQFRKMN-------SDEEQK 725
            ||||||..|::.||..||:||:|||||:|||||||:|:|||.|.|:|.:::       ::|:|:
Zfish   641 VSIDVEGKIFQAAKDAGISLLSITHRPSLWKYHTHLLQFDGEGGWRFEQLDTATRLSLTEEKQR 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCDNP_001245409.1 3a01203 75..715 CDD:273360 353/651 (54%)
LOC100537809XP_003200166.3 SunT 47..687 CDD:331423 356/665 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594202
Domainoid 1 1.000 324 1.000 Domainoid score I1174
eggNOG 1 0.900 - - E1_COG4178
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53776
OrthoDB 1 1.010 - - D146647at33208
OrthoFinder 1 1.000 - - FOG0000393
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100236
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X313
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.660

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