DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl4 and ARF3

DIOPT Version :10

Sequence 1:NP_001245408.1 Gene:Arl4 / 43771 FlyBaseID:FBgn0039889 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_850057.1 Gene:ARF3 / 817014 AraportID:AT2G24765 Length:182 Species:Arabidopsis thaliana


Alignment Length:268 Identity:76/268 - (28%)
Similarity:103/268 - (38%) Gaps:114/268 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VVMLGLDSAGKTTALYRLKFDQYLNTVPTIGFNCEKVQCTLGKAKGVHFLVWDVGGQEKLRPLWR 92
            :::||||:|||||.||||:..:.::|:||||||.|.||     ...:.|.|||:|||..:||.||
plant    20 ILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQ-----YNNIKFQVWDLGGQTSIRPYWR 79

  Fly    93 SYTRCTDGILFVIDSVDTERMEEAKMELMRTAKCPDNQGVPVLILANKQDLPNACGAMELEKLLG 157
            .|...|..:::|:||.||:|:..||.|.....:..:.:|..|||.|||||||.|           
plant    80 CYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGA----------- 133

  Fly   158 LNELYNPVPNISMPSSSDSSPTINLIGCRVSNQSITDKSLEEKKESHLHSSMIHIKPALESKDHN 222
                                              :.|.::.|..|.|                  
plant   134 ----------------------------------LDDAAVTEALELH------------------ 146

  Fly   223 STLSGGALTAFIYPQSHNNSAVLDQKNPQDVKNGFHNKKMNRSSSNSVQFRGWYIQPTCAITGEG 287
                                                          .::.|.|.|..|||:.|||
plant   147 ----------------------------------------------KIKSRQWAIFKTCAVKGEG 165

  Fly   288 LQEGLDAL 295
            |.||||.|
plant   166 LFEGLDWL 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl4NP_001245408.1 P-loop containing Nucleoside Triphosphate Hydrolases 24..311 CDD:476819 76/268 (28%)
ARF3NP_850057.1 Arl1 19..176 CDD:206718 76/268 (28%)

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