DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl4 and arl5c

DIOPT Version :10

Sequence 1:NP_001245408.1 Gene:Arl4 / 43771 FlyBaseID:FBgn0039889 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001037909.1 Gene:arl5c / 733518 XenbaseID:XB-GENE-5898153 Length:179 Species:Xenopus tropicalis


Alignment Length:285 Identity:74/285 - (25%)
Similarity:111/285 - (38%) Gaps:116/285 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GNILDALPSQVATLH--VVMLGLDSAGKTTALYRLKFDQYLNTVPTIGFNCEKVQCTLGKAKGVH 75
            |||...:.|......  |:::|||:|||||.||:...::.::|.||||.|.|::     .::..|
 Frog     2 GNIFTRIMSIFGNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTAPTIGSNVEEI-----ISRNTH 61

  Fly    76 FLVWDVGGQEKLRPLWRSYTRCTDGILFVIDSVDTERMEEAKMELMRTAKCPDNQGVPVLILANK 140
            ||:||:||||.||..|.||...|:.::.||||.|.||:.|.:.||.:.....:.:...:||.|||
 Frog    62 FLMWDIGGQETLRATWNSYYSNTEFVILVIDSTDRERLPETREELYKMLAHEELKDAAILIFANK 126

  Fly   141 QDLPNACGAMELEKLLGLNELYNPVPNISMPSSSDSSPTINLIGCRVSNQSITDKSLEEKKESHL 205
            ||                                                               
 Frog   127 QD--------------------------------------------------------------- 128

  Fly   206 HSSMIHIKPALESKDHNSTLSGGALTAFIYPQSHNNSAVLDQKNPQDVKNGFHNKKMNRSSSNSV 270
                  :|.::.:.:.:|:|:.||                                        :
 Frog   129 ------VKDSMTASEISSSLALGA----------------------------------------I 147

  Fly   271 QFRGWYIQPTCAITGEGLQEGLDAL 295
            :.|.|:||..||:|||||..|||.|
 Frog   148 RDRAWHIQGCCALTGEGLPAGLDWL 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl4NP_001245408.1 P-loop containing Nucleoside Triphosphate Hydrolases 24..311 CDD:476819 70/274 (26%)
arl5cNP_001037909.1 Arl5_Arl8 3..175 CDD:133353 73/284 (26%)

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