DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl4 and arl4c

DIOPT Version :10

Sequence 1:NP_001245408.1 Gene:Arl4 / 43771 FlyBaseID:FBgn0039889 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001016707.1 Gene:arl4c / 549461 XenbaseID:XB-GENE-998820 Length:193 Species:Xenopus tropicalis


Alignment Length:299 Identity:115/299 - (38%)
Similarity:150/299 - (50%) Gaps:109/299 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GNILDALPSQVATLHVVMLGLDSAGKTTALYRLKFDQYLNTVPTIGFNCEKVQCTLGKAKGVHFL 77
            |||...: |...:||:||||||||||||.||||||::::|||||||||.|:::.:.|.|||:...
 Frog     2 GNISSNI-SSFQSLHIVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTERIRLSNGAAKGISCH 65

  Fly    78 VWDVGGQEKLRPLWRSYTRCTDGILFVIDSVDTERMEEAKMELMRTAKCPDNQGVPVLILANKQD 142
            .|||||||||||||:||:||||||::|:||||::|:||||.||.:..|..:|.|.|:|::|||||
 Frog    66 FWDVGGQEKLRPLWKSYSRCTDGIIYVVDSVDSDRLEEAKTELHKVTKFAENLGTPLLVIANKQD 130

  Fly   143 LPNACGAMELEKLLGLNELYNPVPNISMPSSSDSSPTINLIGCRVSNQSITDKSLEEKKESHLHS 207
            ||.:....|:|:.|.|.||            |.|:|                             
 Frog   131 LPKSLAVPEIERQLALQEL------------SPSTP----------------------------- 154

  Fly   208 SMIHIKPALESKDHNSTLSGGALTAFIYPQSHNNSAVLDQKNPQDVKNGFHNKKMNRSSSNSVQF 272
                                                                             
 Frog   155 ----------------------------------------------------------------- 154

  Fly   273 RGWYIQPTCAITGEGLQEGLDALYDMILKRRKINKSNKR 311
              :::||.|||.||||.||:|.||:|||||||..|..|:
 Frog   155 --YHVQPACAIIGEGLTEGMDKLYEMILKRRKTLKQKKK 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl4NP_001245408.1 P-loop containing Nucleoside Triphosphate Hydrolases 24..311 CDD:476819 110/286 (38%)
arl4cNP_001016707.1 Arl4_Arl7 11..193 CDD:206719 111/289 (38%)

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