DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl4 and arf6

DIOPT Version :10

Sequence 1:NP_001245408.1 Gene:Arl4 / 43771 FlyBaseID:FBgn0039889 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001006797.1 Gene:arf6 / 448503 XenbaseID:XB-GENE-5743884 Length:175 Species:Xenopus tropicalis


Alignment Length:267 Identity:80/267 - (29%)
Similarity:110/267 - (41%) Gaps:114/267 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LHVVMLGLDSAGKTTALYRLKFDQYLNTVPTIGFNCEKVQCTLGKAKGVHFLVWDVGGQEKLRPL 90
            :.::|||||:|||||.||:||..|.:.|:||:|||.|.|     ..|.|.|.|||||||:|:|||
 Frog    14 MRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETV-----TYKNVKFNVWDVGGQDKIRPL 73

  Fly    91 WRSYTRCTDGILFVIDSVDTERMEEAKMELMRTAKCPDNQGVPVLILANKQDLPNACGAMELEKL 155
            ||.|...|.|::||:|..|.:|::||:.||.|.....:.:...:||.|||||||:|....|:::.
 Frog    74 WRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEK 138

  Fly   156 LGLNELYNPVPNISMPSSSDSSPTINLIGCRVSNQSITDKSLEEKKESHLHSSMIHIKPALESKD 220
            |||..:                                                         :|
 Frog   139 LGLTRI---------------------------------------------------------RD 146

  Fly   221 HNSTLSGGALTAFIYPQSHNNSAVLDQKNPQDVKNGFHNKKMNRSSSNSVQFRGWYIQPTCAITG 285
            .|                                                    ||:||:||.:|
 Frog   147 RN----------------------------------------------------WYVQPSCATSG 159

  Fly   286 EGLQEGL 292
            :||.|||
 Frog   160 DGLYEGL 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl4NP_001245408.1 P-loop containing Nucleoside Triphosphate Hydrolases 24..311 CDD:476819 80/267 (30%)
arf6NP_001006797.1 ARF 1..175 CDD:128474 80/267 (30%)

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