DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl4 and arl4cb

DIOPT Version :9

Sequence 1:NP_001245408.1 Gene:Arl4 / 43771 FlyBaseID:FBgn0039889 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_998413.1 Gene:arl4cb / 406531 ZFINID:ZDB-GENE-040426-2382 Length:192 Species:Danio rerio


Alignment Length:291 Identity:112/291 - (38%)
Similarity:146/291 - (50%) Gaps:108/291 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SQVATLHVVMLGLDSAGKTTALYRLKFDQYLNTVPTIGFNCEKVQCTLGKAKGVHFLVWDVGGQE 85
            |...:||:||||||||||||.||||||::::|||||||||.||::.:.|.|||:....|||||||
Zfish     9 SAFQSLHIVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTEKIKLSNGTAKGISCHFWDVGGQE 73

  Fly    86 KLRPLWRSYTRCTDGILFVIDSVDTERMEEAKMELMRTAKCPDNQGVPVLILANKQDLPNACGAM 150
            ||||||:||:||||||::|:||||.:|:||||.||.:..|..:|||.|:|::|||||||.:....
Zfish    74 KLRPLWKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTKFAENQGTPLLVIANKQDLPKSLSVA 138

  Fly   151 ELEKLLGLNELYNPVPNISMPSSSDSSPTINLIGCRVSNQSITDKSLEEKKESHLHSSMIHIKPA 215
            ::||.|.|.||        .|:::                                         
Zfish   139 DIEKQLALQEL--------TPATT----------------------------------------- 154

  Fly   216 LESKDHNSTLSGGALTAFIYPQSHNNSAVLDQKNPQDVKNGFHNKKMNRSSSNSVQFRGWYIQPT 280
                                                                       ::|||.
Zfish   155 -----------------------------------------------------------YHIQPA 160

  Fly   281 CAITGEGLQEGLDALYDMILKRRKINKSNKR 311
            |||.||||.||:|.||:||:||||..|..|:
Zfish   161 CAIIGEGLHEGMDKLYEMIVKRRKSLKQKKK 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl4NP_001245408.1 P-loop_NTPase 24..311 CDD:304359 110/286 (38%)
arl4cbNP_998413.1 Arl4_Arl7 11..192 CDD:206719 111/289 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 192 1.000 Domainoid score I3160
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 247 1.000 Inparanoid score I3245
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1457094at2759
OrthoFinder 1 1.000 - - FOG0002276
OrthoInspector 1 1.000 - - otm25238
orthoMCL 1 0.900 - - OOG6_106796
Panther 1 1.100 - - O PTHR11711
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5004
SonicParanoid 1 1.000 - - X1505
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.860

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