DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl4 and arl4ab

DIOPT Version :9

Sequence 1:NP_001245408.1 Gene:Arl4 / 43771 FlyBaseID:FBgn0039889 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_956612.1 Gene:arl4ab / 338267 ZFINID:ZDB-GENE-030219-167 Length:201 Species:Danio rerio


Alignment Length:298 Identity:116/298 - (38%)
Similarity:147/298 - (49%) Gaps:110/298 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ILDALPSQVATLHVVMLGLDSAGKTTALYRLKFDQYLNTVPTIGFNCEKVQCTLG-KAKGVHFLV 78
            |...|||..| ||:|:||||.|||||.||||:|::::|||||.|||.||::..|| |::...|..
Zfish    11 IFPCLPSFQA-LHIVILGLDCAGKTTVLYRLRFNEFVNTVPTKGFNTEKIKVNLGPKSRTATFHF 74

  Fly    79 WDVGGQEKLRPLWRSYTRCTDGILFVIDSVDTERMEEAKMELMRTAKCPDNQGVPVLILANKQDL 143
            |||||||||||||||||||.||::||:||||.|||||||.||.:..:..:|.|||||::||||||
Zfish    75 WDVGGQEKLRPLWRSYTRCADGLVFVVDSVDAERMEEAKTELHKITRLQENLGVPVLVVANKQDL 139

  Fly   144 PNACGAMELEKLLGLNELYNPVPNISMPSSSDSSPTINLIGCRVSNQSITDKSLEEKKESHLHSS 208
            .:|....|:|::|.||||.:..|                                          
Zfish   140 RSALPLSEVEQMLALNELGSHTP------------------------------------------ 162

  Fly   209 MIHIKPALESKDHNSTLSGGALTAFIYPQSHNNSAVLDQKNPQDVKNGFHNKKMNRSSSNSVQFR 273
                                                                             
Zfish   163 ----------------------------------------------------------------- 162

  Fly   274 GWYIQPTCAITGEGLQEGLDALYDMILKRRKINKSNKR 311
             |::||.|||.||||||||:.|:.||:||||:.:..||
Zfish   163 -WHLQPACAIIGEGLQEGLERLHTMIIKRRKMMRQQKR 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl4NP_001245408.1 P-loop_NTPase 24..311 CDD:304359 110/287 (38%)
arl4abNP_956612.1 Arl4_Arl7 18..201 CDD:206719 112/291 (38%)
Gem1 23..>148 CDD:224025 78/124 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 192 1.000 Domainoid score I3160
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4194
Inparanoid 1 1.050 247 1.000 Inparanoid score I3245
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1457094at2759
OrthoFinder 1 1.000 - - FOG0002276
OrthoInspector 1 1.000 - - otm25238
orthoMCL 1 0.900 - - OOG6_106796
Panther 1 1.100 - - O PTHR11711
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5004
SonicParanoid 1 1.000 - - X1505
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.860

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