DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl4 and arl-5

DIOPT Version :9

Sequence 1:NP_001245408.1 Gene:Arl4 / 43771 FlyBaseID:FBgn0039889 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001379051.1 Gene:arl-5 / 176392 WormBaseID:WBGene00000189 Length:178 Species:Caenorhabditis elegans


Alignment Length:134 Identity:56/134 - (41%)
Similarity:77/134 - (57%) Gaps:5/134 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VVMLGLDSAGKTTALYRLKFDQYLNTVPTIGFNCEKVQCTLGKAKGVHFLVWDVGGQEKLRPLWR 92
            ::::|||:|||||.||.......:.|.||||.|.|:|     ..:.:.|::||:||||.||..|.
 Worm    20 IIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEV-----SYRNLDFVIWDIGGQESLRKSWS 79

  Fly    93 SYTRCTDGILFVIDSVDTERMEEAKMELMRTAKCPDNQGVPVLILANKQDLPNACGAMELEKLLG 157
            :|...||.::.||||.||.|:...|.:|....:..|.....:|:||||||||.|....|:...||
 Worm    80 TYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVLANKQDLPGAMNPAEVSTQLG 144

  Fly   158 LNEL 161
            |..|
 Worm   145 LQTL 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl4NP_001245408.1 P-loop_NTPase 24..311 CDD:304359 56/134 (42%)
arl-5NP_001379051.1 Arl5_Arl8 3..177 CDD:133353 56/134 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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