DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl4 and arf11l.2

DIOPT Version :10

Sequence 1:NP_001245408.1 Gene:Arl4 / 43771 FlyBaseID:FBgn0039889 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001120457.2 Gene:arf11l.2 / 101734701 XenbaseID:XB-GENE-22065200 Length:188 Species:Xenopus tropicalis


Alignment Length:292 Identity:84/292 - (28%)
Similarity:120/292 - (41%) Gaps:118/292 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GNILDALPSQVATLH-----VVMLGLDSAGKTTALYRLKFDQYLNTVPTIGFNCEKVQCTLGKAK 72
            ||:..:|...:...|     ::|||||:|||||.||:|||::.:.|:||||||.|.|:    ...
 Frog     2 GNLFSSLYQILMGFHGTKARIIMLGLDAAGKTTVLYKLKFNETVTTIPTIGFNVETVE----PMH 62

  Fly    73 GVHFLVWDVGGQEKLRPLWRSYTRCTDGILFVIDSVDTERMEEAKMELMRTAKCPDNQGVPVLIL 137
            .|.|.|||||||.::|.||:.|....||::||:||.|.||.:||::||.......:.:|||.:::
 Frog    63 NVSFTVWDVGGQGRIRALWKYYFTNADGLVFVVDSADCERFQEARLELEAILDTDEMRGVPFVVM 127

  Fly   138 ANKQDLPNACGAMELEKLLGLNELYNPVPNISMPSSSDSSPTINLIGCRVSNQSITDKSLEEKKE 202
            |||||||.:...||:.:.|||       |.|                                  
 Frog   128 ANKQDLPGSRRPMEVAEELGL-------PKI---------------------------------- 151

  Fly   203 SHLHSSMIHIKPALESKDHNSTLSGGALTAFIYPQSHNNSAVLDQKNPQDVKNGFHNKKMNRSSS 267
                                              |.|                            
 Frog   152 ----------------------------------QGH---------------------------- 154

  Fly   268 NSVQFRGWYIQPTCAITGEGLQEGLDALYDMI 299
                  .|::|..||.||:||.|||:...:::
 Frog   155 ------PWHVQGCCATTGDGLVEGLEVFTNLV 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl4NP_001245408.1 P-loop containing Nucleoside Triphosphate Hydrolases 24..311 CDD:476819 81/281 (29%)
arf11l.2NP_001120457.2 Arf_Arl 21..174 CDD:206644 79/265 (30%)

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