DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl4 and ARL4C

DIOPT Version :9

Sequence 1:NP_001245408.1 Gene:Arl4 / 43771 FlyBaseID:FBgn0039889 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001269360.1 Gene:ARL4C / 10123 HGNCID:698 Length:201 Species:Homo sapiens


Alignment Length:299 Identity:116/299 - (38%)
Similarity:152/299 - (50%) Gaps:109/299 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GNILDALPSQVATLHVVMLGLDSAGKTTALYRLKFDQYLNTVPTIGFNCEKVQCTLGKAKGVHFL 77
            |||...: |...:||:||||||||||||.||||||::::|||||||||.||::.:.|.|||:...
Human     2 GNISSNI-SAFQSLHIVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTEKIKLSNGTAKGISCH 65

  Fly    78 VWDVGGQEKLRPLWRSYTRCTDGILFVIDSVDTERMEEAKMELMRTAKCPDNQGVPVLILANKQD 142
            .|||||||||||||:||:||||||::|:||||.:|:||||.||.:..|..:|||.|:|::|||||
Human    66 FWDVGGQEKLRPLWKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTKFAENQGTPLLVIANKQD 130

  Fly   143 LPNACGAMELEKLLGLNELYNPVPNISMPSSSDSSPTINLIGCRVSNQSITDKSLEEKKESHLHS 207
            ||.:....|:||.|.|:||        :|:::                                 
Human   131 LPKSLPVAEIEKQLALHEL--------IPATT--------------------------------- 154

  Fly   208 SMIHIKPALESKDHNSTLSGGALTAFIYPQSHNNSAVLDQKNPQDVKNGFHNKKMNRSSSNSVQF 272
                                                                             
Human   155 ----------------------------------------------------------------- 154

  Fly   273 RGWYIQPTCAITGEGLQEGLDALYDMILKRRKINKSNKR 311
              :::||.|||.||||.||:|.||:|||||||..|..|:
Human   155 --YHVQPACAIIGEGLTEGMDKLYEMILKRRKSLKQKKK 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl4NP_001245408.1 P-loop_NTPase 24..311 CDD:304359 111/286 (39%)
ARL4CNP_001269360.1 Arl4_Arl7 11..192 CDD:206719 112/289 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 196 1.000 Domainoid score I3118
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 247 1.000 Inparanoid score I3267
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1457094at2759
OrthoFinder 1 1.000 - - FOG0002276
OrthoInspector 1 1.000 - - otm40854
orthoMCL 1 0.900 - - OOG6_106796
Panther 1 1.100 - - O PTHR11711
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5004
SonicParanoid 1 1.000 - - X1505
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.860

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