DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl4 and ARL17B

DIOPT Version :9

Sequence 1:NP_001245408.1 Gene:Arl4 / 43771 FlyBaseID:FBgn0039889 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001350734.1 Gene:ARL17B / 100506084 HGNCID:32387 Length:181 Species:Homo sapiens


Alignment Length:91 Identity:37/91 - (40%)
Similarity:53/91 - (58%) Gaps:8/91 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GNILDALPSQV---ATLHVVMLGLDSAGKTTALYRLKFDQYLNTVPTIGFNCEKVQCTLGKAKGV 74
            |||.:.|...:   ..:.:::|.||:|||||.||:||..:.:..|||:||..|.|:     .|..
Human     2 GNIFEKLFKSLLGKKKMRILILSLDTAGKTTILYKLKLGETVPAVPTVGFCVETVE-----YKNN 61

  Fly    75 HFLVWDVGGQEKLRPLWRSYTRCTDG 100
            .|.|||||...|:||||:.:.:.|.|
Human    62 TFAVWDVGSHFKIRPLWQHFFQNTKG 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl4NP_001245408.1 P-loop_NTPase 24..311 CDD:304359 33/77 (43%)
ARL17BNP_001350734.1 P-loop_NTPase 1..>87 CDD:328724 36/89 (40%)
ARL17 115..176 CDD:318132
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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