DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl4 and arl11

DIOPT Version :9

Sequence 1:NP_001245408.1 Gene:Arl4 / 43771 FlyBaseID:FBgn0039889 Length:313 Species:Drosophila melanogaster
Sequence 2:XP_002935781.1 Gene:arl11 / 100490310 XenbaseID:XB-GENE-1012125 Length:180 Species:Xenopus tropicalis


Alignment Length:166 Identity:73/166 - (43%)
Similarity:98/166 - (59%) Gaps:17/166 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGATMVKPLVKNGNILDALPSQVATLHVVMLGLDSAGKTTALYRLKFDQYLNTVPTIGFNCEKVQ 65
            ||....|||.|.            ...|||:|||.:||:|.||:||.:|.:.|.||:|||.|.::
 Frog     1 MGGQNSKPLHKK------------QPRVVMMGLDYSGKSTILYKLKINQLVETFPTVGFNVEHIE 53

  Fly    66 CTLGKAKGVHFLVWDVGGQEKLRPLWRSYTRCTDGILFVIDSVDTERMEEAKMELMRTAKCPDNQ 130
                .:|.|...|||||||:||||.|:.|...||.::||:||.|.:|:.:|..||:......:..
 Frog    54 ----MSKNVSVTVWDVGGQDKLRPNWKEYLEDTDVLIFVVDSSDPDRLPDATAELLSILNNENMA 114

  Fly   131 GVPVLILANKQDLPNACGAMELEKLLGLNELYNPVP 166
            |||.||||||||:.:|..|.||:.:|.| |.|:..|
 Frog   115 GVPFLILANKQDITDALPAKELKHILKL-ENYDDRP 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl4NP_001245408.1 P-loop_NTPase 24..311 CDD:304359 67/143 (47%)
arl11XP_002935781.1 P-loop_NTPase 15..173 CDD:422963 67/140 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D587782at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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