DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pan and TCF7L1

DIOPT Version :9

Sequence 1:NP_726528.2 Gene:pan / 43769 FlyBaseID:FBgn0085432 Length:1192 Species:Drosophila melanogaster
Sequence 2:XP_006712172.1 Gene:TCF7L1 / 83439 HGNCID:11640 Length:589 Species:Homo sapiens


Alignment Length:707 Identity:182/707 - (25%)
Similarity:270/707 - (38%) Gaps:225/707 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   378 SNESILPQKTNAVHSKIPDVESESDFFLTSAKPKTLVEIEDIILQLASSVNMHQSSSASTPHESY 442
            :|:.::|.:......:.|..:|.|       ..:.|.|::      :|.||..::.|:|      
Human    34 ANDELIPFQDEGGEEQEPSSDSAS-------AQRDLDEVK------SSLVNESENQSSS------ 79

  Fly   443 SDSVKSDCEESNSAPTCIWHSTRQTFRHKKD---------------------------------- 473
            |||      |:...|    ...|.||:..:|                                  
Human    80 SDS------EAERRP----QPVRDTFQKPRDYFAEVRRPQDSAFFKGPPYPGYPFLMIPDLSSPY 134

  Fly   474 -----VEPCSTAAEIILEYASLS--SSSNIETSRLLTSA--SNLTDVTEN-YNVTTQLPIVFNYN 528
                 :.|......:.:::..|.  ||:.::.:|..:.|  ||...|.:: :::....|::...|
Human   135 LSNGPLSPGGARTYLQMKWPLLDVPSSATVKDTRSPSPAHLSNKVPVVQHPHHMHPLTPLITYSN 199

  Fly   529 RESSAESIVT--DPLLVPEFSTAPSTPSTGSNS---GCSTGMVSGI---FGLSQNRRKQRL---- 581
            ...|..|..|  .|.:.|:.:..|..|.....|   ..|.|.|..|   .|....::.|.:    
Human   200 DHFSPGSPPTHLSPEIDPKTAGIPRPPHPSELSPYYPLSPGAVGQIPHPLGWLVPQQGQPMYSLP 264

  Fly   582 ---ARH-IETLTTNSFKSNAIRGNVDNEITNQLKTSPSIRALPTENVSHLITKTLSSANASLTAQ 642
               .|| ...|..|:..|:.:.......:     .:|:...|||..:.|      .:..:.:..|
Human   265 PGGFRHPYPALAMNASMSSLVSSRFSPHM-----VAPAHPGLPTSGIPH------PAIVSPIVKQ 318

  Fly   643 ELSITNLFKERLCALQGNAGSMKTEIFPMIDAPYDLSIGSKTKHMNLEAKHTSNAQSNESKETT- 706
            |                             .||..|                |.|.|.:|..|. 
Human   319 E-----------------------------PAPPSL----------------SPAVSVKSPVTVK 338

  Fly   707 -NDKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHELSREEQSKYYEKARQE 770
             .::||||:||||||||||||||||||||||||||||||||||||:||.||||||:||||.||:|
Human   339 KEEEKKPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYELARKE 403

  Fly   771 RQLHMELYPGWSARDNYGYVSKKKKRKKDRSTTDSGGNNMKKCRARFGLDQQSQWCKPCRRKKKC 835
            ||||.:|||.||||||||   ||||||:::..:.:......         |:::.....:.||.|
Human   404 RQLHSQLYPTWSARDNYG---KKKKRKREKQLSQTQSQQQV---------QEAEGALASKSKKPC 456

  Fly   836 IRYMEALNGNGPAED--GSCFDEHGSQLSDDDEDDYDDDKLGGSCGSADETNKIEDEDSESLNQS 898
            ::|:       |.|.  .|....|||.|.                                 :.:
Human   457 VQYL-------PPEKPCDSPASSHGSMLD---------------------------------SPA 481

  Fly   899 MPSPGCLSGLSSLQSPSTTMS-LASPLNMNANSATNVIFPASSNALLIVGA---------DQPTA 953
            .||    :.|:|..:|:.|.| .|.||::.....|.......|.|.|...|         .||..
Human   482 TPS----AALASPAAPAATHSEQAQPLSLTTKPETRAQLALHSAAFLSAKAAASSSGQMGSQPPL 542

  Fly   954 QQRPTLVSTSGSSSGSTSSISTTPNTSSTVSPVTCMTGPCLGSSQERAMMLGNRFSH 1010
            ..||..:     .|..|:.:::.|:     .|.|......|...|.:.:.|..:.:|
Human   543 LSRPLPL-----GSMPTALLASPPS-----FPATLHAHQALPVLQAQPLSLVTKSAH 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
panNP_726528.2 SOX-TCF_HMG-box 713..784 CDD:238684 61/70 (87%)
TCF7L1XP_006712172.1 CTNNB1_binding 30..251 CDD:285538 44/245 (18%)
SOX-TCF_HMG-box 346..417 CDD:238684 61/70 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 84 1.000 Domainoid score I8240
eggNOG 1 0.900 - - E1_KOG3248
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000839
OrthoInspector 1 1.000 - - otm42264
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10373
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
76.870

Return to query results.
Submit another query.