DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pan and tcf7

DIOPT Version :9

Sequence 1:NP_726528.2 Gene:pan / 43769 FlyBaseID:FBgn0085432 Length:1192 Species:Drosophila melanogaster
Sequence 2:XP_031753653.1 Gene:tcf7 / 395061 XenbaseID:XB-GENE-855462 Length:488 Species:Xenopus tropicalis


Alignment Length:701 Identity:192/701 - (27%)
Similarity:270/701 - (38%) Gaps:272/701 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 IREQ---KNILIDIKKKLDNLSDSSGKFRKRLSVRQSHIEVNNGSNSALEESVRRQLNGNRKSIE 324
            |||.   :..|.|:|..|.|.|:.|...|    |.:||           .|::||.         
 Frog    31 IRESAFTERDLADLKSSLVNESEVSSHPR----VPESH-----------PEAMRRT--------- 71

  Fly   325 NLLEEVKRLYNQWSSAELYYVRSL---QRLGLPSEEDGEYTST--PTHTIMALAAIALSNESILP 384
                         ..|:|.|...|   ...|:..:::|.|..:  |::..:.|:...|||.|:  
 Frog    72 -------------QDAQLVYQDKLTDHMEDGVKHQDEGMYKGSGYPSYPFLMLSDPYLSNGSV-- 121

  Fly   385 QKTNAVHSKIPDVESESDFFLTSAKPKTLVEIEDIILQLASSVN-MHQSSSASTPHESYSDSVKS 448
               :|:.||:|                        ::|.:..|: :...::.|..|.|:|..:.:
 Frog   122 ---SALSSKVP------------------------VVQPSHGVHPLIPYNNESFSHGSHSTHLPA 159

  Fly   449 DCEESNSAPTCIWHSTRQTFRHKKDVEPCSTAAEIILEYASLSSSSNIETSRLLTSASNLTDVTE 513
            |..:....             |:    |..||                                 
 Frog   160 DLNQKQGV-------------HR----PAQTA--------------------------------- 174

  Fly   514 NYNVTTQLPIVFNYNRESSAESIVTDPLLVPEFSTAPSTPSTGSNS-------GCSTGMVSGIFG 571
              ::.|..|:                    |.......:||.|..|       .|         |
 Frog   175 --DIPTFYPL--------------------PSGGVGQISPSVGWQSQPVYPIPSC---------G 208

  Fly   572 LSQNRRKQRLARHIETLTTNSFKSNAIRGNVDNEITNQLKTSPSIRALPTENVSHLITKTLSSAN 636
            ..|                 .:.:....|...:...:.|..|||:.   |..:.|          
 Frog   209 FRQ-----------------PYSATLSSGPSYSRFPHPLMLSPSMH---TTGIPH---------- 243

  Fly   637 ASLTAQELSITNLFKERLCALQGNAGSMKTEIFPMIDAPYDLSIGSKTKHMNLEAKHTSNAQSNE 701
                                             |.| .|:.   |:|    :::. :..|.:.:.
 Frog   244 ---------------------------------PAI-IPHS---GNK----DIDC-YERNMKPHS 266

  Fly   702 SKETTNDKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHELSREEQSKYYEK 766
            ..:...:.|||.|||||||||||||||||||:||||||||||||||||||||.|||||||||||.
 Frog   267 EPKREREPKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQSKYYEL 331

  Fly   767 ARQERQLHMELYPGWSARDNYGYVSKKKKRKKDRSTTDSGGNNMKKCRARFGLDQQSQWCKPCRR 831
            ||:||||||:||||||||||||...::.:.|...|::|.|  :.|||||||||:||:.||.||||
 Frog   332 ARKERQLHMQLYPGWSARDNYGKRKRRTREKHQDSSSDPG--SPKKCRARFGLNQQTDWCGPCRR 394

  Fly   832 KKKCIRYMEALNGNGPAEDGSCFDEHGSQLSDDDEDDYDDDKLGGSCGSADETNKIEDEDSESLN 896
            |||||||::.        :|.|    ||.:|.|              |||      .|.....||
 Frog   395 KKKCIRYLQG--------EGRC----GSPVSSD--------------GSA------IDSPPSPLN 427

  Fly   897 QSMPSPGCLSGLSSLQSPSTTMSLASPLNMNANSAT---NVIFPASSNALL 944
            .....|......:.|.||:.::..|...:.:::|:|   ::|.|....|.|
 Frog   428 SRHSMPSSAYPTAKLSSPADSVQSAQSCSPSSSSSTVRSSLISPGYKGAFL 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
panNP_726528.2 SOX-TCF_HMG-box 713..784 CDD:238684 64/70 (91%)
tcf7XP_031753653.1 CTNNB1_binding 1..196 CDD:400583 50/302 (17%)
SOX-TCF_HMG-box 279..349 CDD:238684 64/69 (93%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 134 1.000 Domainoid score I4959
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H134099
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000839
OrthoInspector 1 1.000 - - otm49493
Panther 1 1.100 - - LDO PTHR10373
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.010

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