DRSC/TRiP Functional Genomics Resources

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Protein Alignment pan and nccrp1

DIOPT Version :9

Sequence 1:NP_726528.2 Gene:pan / 43769 FlyBaseID:FBgn0085432 Length:1192 Species:Drosophila melanogaster
Sequence 2:NP_570996.2 Gene:nccrp1 / 30078 ZFINID:ZDB-GENE-000210-13 Length:237 Species:Danio rerio


Alignment Length:93 Identity:20/93 - (21%)
Similarity:36/93 - (38%) Gaps:25/93 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 PDGGFNNQYTQLTANKIEQYNCNDLDK---VCIVPSSRSDGME-------ASFSELLLSPNKLIS 102
            |:|.|:...|.   .::..|:.:.:..   :|.:|..|...:|       |...:.||       
Zfish    76 PEGNFSGWKTN---TEVLPYDTSGIPPGVVICQLPQHRWFTLEQCVDLKAAGLWDQLL------- 130

  Fly   103 QPWQTAEEIENWQNDSFRQRNEMFSCIY 130
            ..:|....||:|..:|     ::..|||
Zfish   131 DDFQPEIVIEDWYEES-----QLHKCIY 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
panNP_726528.2 SOX-TCF_HMG-box 713..784 CDD:238684
nccrp1NP_570996.2 FBA 32..229 CDD:282196 20/93 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..82 3/5 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3248
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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