DRSC/TRiP Functional Genomics Resources

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Protein Alignment pan and Tcf7l1

DIOPT Version :9

Sequence 1:NP_726528.2 Gene:pan / 43769 FlyBaseID:FBgn0085432 Length:1192 Species:Drosophila melanogaster
Sequence 2:NP_001073290.1 Gene:Tcf7l1 / 21415 MGIID:1202876 Length:599 Species:Mus musculus


Alignment Length:763 Identity:188/763 - (24%)
Similarity:283/763 - (37%) Gaps:247/763 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 SDSSGKFRKRLSVRQSHIEVNNGSNSALEESVRRQLNGNRKSIE---NLLEEVKRLYNQWSSAEL 342
            |||:...|....|:.|.:..:...:|:.:....|:....|.:.:   :...||:|          
Mouse    51 SDSASAQRDLDEVKSSLVNESENQSSSSDSEAERRPQPARDAFQKPRDYFAEVRR---------- 105

  Fly   343 YYVRSLQRLGLPSEEDGEYTSTPTHT----IMALAAIALSNESILPQKTNAVHSKIPDVESE--S 401
                         .:||.:...|.:.    :|                       |||:.|.  |
Mouse   106 -------------PQDGAFFKGPAYPGYPFLM-----------------------IPDLSSPYLS 134

  Fly   402 DFFLTSAKPKTLVEIEDIILQLASSVNMHQSSSASTPHESYSDSVK---SDCEESNSAPTCIWHS 463
            :..|:....:|.::::..:|.:.||..:..:.|.|..| .|.|..:   .....||..|      
Mouse   135 NGPLSPGGARTYLQMKWPLLDVPSSATVKDTRSPSPAH-LYGDPARWMVPPTFRSNKVP------ 192

  Fly   464 TRQTFRHKKDVEPCSTAAEIILEYASLSSSSNIETSRLLTSASNLTDVTENYNVTTQLP------ 522
               ..:|...:.|.:          .|.:.||...|    .||..|.::...:..|.:|      
Mouse   193 ---VVQHPHHMHPLT----------PLITYSNDHFS----PASPPTHLSPEIDPKTGIPRPPHPS 240

  Fly   523 -IVFNYNRESSAESIVTDPL--LVPE-----FSTAPSTPSTGSNSGCSTGMVSGIFGLSQNRRKQ 579
             :...|.....|...:..||  |||:     :|..|                 |.|         
Mouse   241 ELSPYYPLSPGAVGQIPHPLGWLVPQQGQPMYSLPP-----------------GGF--------- 279

  Fly   580 RLARH-IETLTTNSFKSNAIRGNVDNEITNQLKTSPSIRALPTENVSHLITKTLSSANASLTAQE 643
               || ...|..|:..|:.:.....:.:      :|:...|||..:.|                .
Mouse   280 ---RHPYPALAMNASMSSLVSSRFPHMV------APAHPGLPTSGIPH----------------P 319

  Fly   644 LSITNLFKERLCALQGNAGSMKTEIFPMIDAPYDLSIGSKTKHMNLEAKHTSNAQSNESKETTND 708
            ..::.:.|:...|         ..:.|.:.|...:::                     .||   :
Mouse   320 AIVSPIVKQEPAA---------PSLSPAVSAKSPVTV---------------------KKE---E 351

  Fly   709 KKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHELSREEQSKYYEKARQERQL 773
            :||||:||||||||||||||||||||||||||||||||||||:||.||||||:||||.||:||||
Mouse   352 EKKPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYELARKERQL 416

  Fly   774 HMELYPGWSARDNYGYVSKKKKRKKDRSTTDSGGNNMKKCRARFGLDQQSQWCKPCRRKKKCIRY 838
            |.:|||.||||||||   ||||||:::..:.:.....         .|:::.....:.||.||:|
Mouse   417 HAQLYPTWSARDNYG---KKKKRKREKQLSQTQSQQQ---------IQEAEGALASKSKKPCIQY 469

  Fly   839 MEALNGNGPAED--GSCFDEHGSQLSDDDEDDYDDDKLGGSCGSADETNKIEDEDSESLNQSMPS 901
            :       |.|.  .|....|||.|.                                 :.:.||
Mouse   470 L-------PPEKPCDSPASSHGSTLD---------------------------------SPATPS 494

  Fly   902 PGCLSGLSSLQSPSTTMS-LASPLNMNANSATNVIFPASSNALLIVGADQPTAQQ---RPTLVST 962
                :.|:|..:|:.|.| .|.||::.............|.|.|...|....:.|   :|.|:|.
Mouse   495 ----AALASPAAPAATHSEQAQPLSLTTKPEARAQLALHSAAFLSAKAAASNSSQMGSQPPLLSR 555

  Fly   963 SGSSSGSTSSISTTPNTSSTVSPVTCMTGPCLGSSQERAMMLGNRFSH 1010
            ........:::.|:|.|    .|.|......|...|.:.:.|..:.:|
Mouse   556 PLPLGSMPAALLTSPPT----FPATLHAHQALPVLQAQPLSLVTKSAH 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
panNP_726528.2 SOX-TCF_HMG-box 713..784 CDD:238684 61/70 (87%)
Tcf7l1NP_001073290.1 CTNNB1_binding 28..262 CDD:285538 49/280 (18%)
SOX-TCF_HMG-box 356..427 CDD:238684 61/70 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3248
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000839
OrthoInspector 1 1.000 - - otm57818
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10373
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.870

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