Protein Alignment pan and pop-1

DIOPT Version :9

• Sequence 1: NP_726528.2
• Gene: pan / 43769
• FlyBaseID: FBgn0085432
• Length: 1192
• Species: Drosophila melanogaster
• Sequence 2: NP_491053.4
• Gene: pop-1 / 171849
• WormBaseID: WBGene00004077
• Length: 438
• Species: Caenorhabditis elegans
• Alignment Length: 309
• Identity: 102/309 - (33%)
• Similarity: 152/309 - (49%)
• Gaps: 62/309 - (20%)

  Fly   674 APYDLSIGSKTKHMNLEA-KHTSN-AQSNESKETTND---KKKPHIKKPLNAFMLYMKEMRAKVV 733
            ||.::..|.....|.:.. .|.|: |..|..:.....   ||..|:||||||||.:|||.|..::
 Worm   147 APLNMRAGHPMNQMGMPPYMHPSSMAPQNVDRRAQGGGKAKKDDHVKKPLNAFMWFMKENRKALL 211

  Fly   734 AEC--TLKESAAINQILGRRWHELSREEQSKYYEKARQERQLHMELYPGWSARDNYGYVSKKKKR 796
            .|.  ..|:||.:|:.||:|||:||:|||:||:|.|:::::.|.|.||.||||:||....||.|:
 Worm   212 EEIGNNEKQSAELNKELGKRWHDLSKEEQAKYFEMAKKDKETHKERYPEWSARENYAVNKKKTKK 276

  Fly   797 KKDRSTTDSGGNNMKKCRARFGLDQQSQWCKPCRRKKKCIRYMEALNGNGPAEDGSCFDEHGSQL 861
            ::|:| ..|..|:.||||||||::....|||.|:|||||
 Worm   277 RRDKS-IPSENNDQKKCRARFGVNNTEMWCKFCKRKKKC-------------------------- 314

  Fly   862 SDDDEDDYDDDKLGGSCGSADETNKIEDEDSE---SLNQSMPSPGCLSG--LSSLQSPST---TM 918
                  :|..|:.|||    |.|:..:...:.   |.:...|||...:|  |::.|..:.   ||
 Worm   315 ------EYATDRSGGS----DITDSQDGRGTSGAYSSSSESPSPKANAGIALTTQQQQAAMMHTM 369

  Fly   919 SLASPLNMNANSATNVIFPASSNALLIVGADQPTAQQRPTLVSTSGSSS 967
            .:...|.....::|:|..|.:|:          :|.:.|...:.|.|.|
 Worm   370 LMQMRLGSTTGASTHVPSPLASS----------SAGRSPLDANASDSES 408

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pan	NP_726528.2	SOX-TCF_HMG-box	713..784	CDD:238684	38/72 (53%)
pop-1	NP_491053.4	SOX-TCF_HMG-box	191..264	CDD:238684	38/72 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160156090
Domainoid	1	1.000	81	1.000	Domainoid score	I5490
eggNOG	1	0.900	-	-		E1_KOG3248
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S4297
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000839
OrthoInspector	1	1.000	-	-		oto18331
orthoMCL	1	0.900	-	-		OOG6_107890
Panther	1	1.100	-	-	LDO	PTHR10373
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2732
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	11	10.770