DRSC/TRiP Functional Genomics Resources

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Protein Alignment pan and tcf7l2

DIOPT Version :9

Sequence 1:NP_726528.2 Gene:pan / 43769 FlyBaseID:FBgn0085432 Length:1192 Species:Drosophila melanogaster
Sequence 2:XP_031760561.1 Gene:tcf7l2 / 100101719 XenbaseID:XB-GENE-485975 Length:628 Species:Xenopus tropicalis


Alignment Length:548 Identity:182/548 - (33%)
Similarity:255/548 - (46%) Gaps:133/548 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   485 LEYASLSSSSNIETSRLLTSA---SNLTDVTENYNVTTQLPIVFNYNRESSAESIVTDPLLVPEF 546
            ::..||.|...::.:|..:.|   ||...|.::.:....|..:..|:.|...      |...|..
 Frog   157 VQAGSLQSRQGLKDTRSPSPAHIVSNKVPVVQHPHHVHPLTPLITYSNEHFT------PGNPPPH 215

  Fly   547 STAPSTPSTGSNSGCSTGMVSGIFGLSQNRRKQ----------RLARHIETLTTNSFK-----SN 596
            ..|...|.||.........:|..:.||.....|          :..:.:..:||..|:     :.
 Frog   216 LQADVDPKTGIPRPPHPPDISPYYPLSPGAVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTAL 280

  Fly   597 AIRGNVDNEITNQLKTS--PSIRALPTENVSH--LITKTLSSANASLTAQELSITNLFKERLCAL 657
            .:..::.:.::::....  |...:|.|..:.|  ::|.|:.        ||.|            
 Frog   281 TVNASMSSFLSSRFPPHMVPPHHSLHTTGIPHPAIVTPTVK--------QESS------------ 325

  Fly   658 QGNAGSMKTEIFPMIDAPYDLSIGSKTKHMNLEAKHTSNAQSNESKETTNDKKKPHIKKPLNAFM 722
            |.:.||:                            |:|..|.::.:|   :||||||||||||||
 Frog   326 QSDMGSL----------------------------HSSKHQDSKKEE---EKKKPHIKKPLNAFM 359

  Fly   723 LYMKEMRAKVVAECTLKESAAINQILGRRWHELSREEQSKYYEKARQERQLHMELYPGWSARDNY 787
            |||||||||||||||||||||||||||||||.||||||:||||.||:||||||:|||||||||||
 Frog   360 LYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNY 424

  Fly   788 -GYVSKKKKRKKDRSTTDSGGNN------------------MKKCRARFGLDQQSQWCKPCRRKK 833
             |...||||||:::...::..::                  .||||||||||||:.||.||||||
 Frog   425 VGAYGKKKKRKREKQQGEANEHSECYLNPCLSLPPITDLSAPKKCRARFGLDQQNNWCGPCRRKK 489

  Fly   834 KCIRYMEALNGNG-----PAEDGSCFDEHGSQLSDDDEDDYDDDKLGGSCGSADETNKIEDEDSE 893
            |||||::   |.|     |:.|||..|...|..:..|....|              :|.:.|.::
 Frog   490 KCIRYIQ---GEGSCVSPPSSDGSLLDSPPSSPAMPDSPASD--------------SKPQTEQTQ 537

  Fly   894 SLNQSM-PSP---GCLSGLSSLQSPSTTMSLASPLNMNANSAT-----NVIFPASSNALLIVGAD 949
            .|:.|: |.|   .|:......|||:...| |.|:.:..|.|.     ||:..:....|.:.   
 Frog   538 PLSLSLKPDPLARICVPHSPLAQSPARKPS-ALPVTICQNGAEHAHPHNVLQSSLPYGLSLT--- 598

  Fly   950 QPTAQQRPTLVSTSGSSSGSTSSISTTP 977
            ||:....|:..|.:|::.....|:.|.|
 Frog   599 QPSTSFLPSHRSLAGTTQLQPLSLVTKP 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
panNP_726528.2 SOX-TCF_HMG-box 713..784 CDD:238684 65/70 (93%)
tcf7l2XP_031760561.1 CTNNB1_binding 17..255 CDD:400583 21/103 (20%)
SOX-TCF_HMG-box 354..421 CDD:238684 61/66 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 134 1.000 Domainoid score I4959
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000839
OrthoInspector 1 1.000 - - otm49493
Panther 1 1.100 - - O PTHR10373
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.100

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