DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS3A and RPS3A

DIOPT Version :9

Sequence 1:NP_001245404.1 Gene:RpS3A / 43768 FlyBaseID:FBgn0017545 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_000997.1 Gene:RPS3A / 6189 HGNCID:10421 Length:264 Species:Homo sapiens


Alignment Length:268 Identity:183/268 - (68%)
Similarity:213/268 - (79%) Gaps:4/268 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVGKNKGLSKGGKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGR 65
            |||||||.|:||||||.|||||||||:|||||||||.||..|.||||||.||||.:||||.||||
Human     1 MAVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGR 65

  Fly    66 VFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEA 130
            ||||||||||.|   |.:||||:||.||||.:|.|.||||||||.||..||||||||:|||.|:.
Human    66 VFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDV 127

  Fly   131 KTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDS 195
            ||.||||||:||:|||.|.....|||.|||..|||:||.:|.:|:|.||...|||::||||..||
Human   128 KTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDS 192

  Fly   196 IAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGY 260
            |.|||||:||.|||||||::||||:||||:|::.||:||||: |..|.:|.....||.::|.:||
Human   193 IGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE-GSSSGKATGDETGAKVERADGY 256

  Fly   261 EPPVQEAV 268
            ||||||:|
Human   257 EPPVQESV 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS3ANP_001245404.1 Ribosomal_S3Ae 21..224 CDD:395802 142/202 (70%)
RPS3ANP_000997.1 Ribosomal_S3Ae 21..221 CDD:395802 142/202 (70%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..264 16/32 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165144699
Domainoid 1 1.000 292 1.000 Domainoid score I1512
eggNOG 1 0.900 - - E1_COG1890
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 361 1.000 Inparanoid score I2200
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62242
OrthoDB 1 1.010 - - D1207239at2759
OrthoFinder 1 1.000 - - FOG0002587
OrthoInspector 1 1.000 - - oto89179
orthoMCL 1 0.900 - - OOG6_100723
Panther 1 1.100 - - LDO PTHR11830
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2271
SonicParanoid 1 1.000 - - X1698
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.800

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