Protein Alignment RpS3A and CYLD

DIOPT Version :9

• Sequence 1: NP_001245404.1
• Gene: RpS3A / 43768
• FlyBaseID: FBgn0017545
• Length: 268
• Species: Drosophila melanogaster
• Sequence 2: NP_609371.2
• Gene: CYLD / 34380
• FlyBaseID: FBgn0032210
• Length: 639
• Species: Drosophila melanogaster
• Alignment Length: 136
• Identity: 24/136 - (17%)
• Similarity: 48/136 - (35%)
• Gaps: 62/136 - (45%)

  Fly   154 RKTCYAQQSQVRKIRARMTDIITNEVSG-----ADLKQLVN------------------------ 189
            ||..:.:..:|.|:|..:..:  :.|||     .|.::.:|
  Fly   332 RKNVFVRSDRVMKLRELLDQL--SSVSGLTCEEKDPEEFLNSLLSQIMRVEPFLKLSSGQDSYFY 394

  Fly   190 --------KLALDSIAKDIEKSCQRIYPLHDVYIRKVK---VLKKPRF----------------D 227
                    ||.|.|:.:..|:|    :...|:.:::|.   :::.|||                |
  Fly   395 QLFVEKDEKLTLPSVQQLFEQS----FHSSDIKLKEVPSCFIIQMPRFGKNYKMYPRILPSQVLD 455

  Fly   228 VSKLLE 233
            |:.::|
  Fly   456 VTDIIE 461

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpS3A	NP_001245404.1	Ribosomal_S3Ae	21..224	CDD:395802	18/109 (17%)
CYLD	NP_609371.2	CAP_GLY	143..219	CDD:214997
		Peptidase_C19N	276..631	CDD:239135	24/136 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11830
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100