DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS3A and rps3a

DIOPT Version :10

Sequence 1:NP_524618.1 Gene:RpS3A / 43768 FlyBaseID:FBgn0017545 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_956353.1 Gene:rps3a / 337240 ZFINID:ZDB-GENE-030131-9184 Length:267 Species:Danio rerio


Alignment Length:270 Identity:181/270 - (67%)
Similarity:213/270 - (78%) Gaps:5/270 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVGKNKGLSKGGKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGR 65
            |||||||.|:||||||.|||:|||||:|||||||||.||..|.:|||||.||||.|||||.||||
Zfish     1 MAVGKNKRLTKGGKKGAKKKIVDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGR 65

  Fly    66 VFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEA 130
            ||||||||||.|   |.:||||:|:.||||.:|.|.||||||||.||..||||||||:|||.|:.
Zfish    66 VFEVSLADLQND---EVAFRKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDV 127

  Fly   131 KTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDS 195
            ||.||||||:||:|||.|.....|||.|||..|||:||.:|.:|:|.||...|||::||||..||
Zfish   128 KTTDGYLLRLFCVGFTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDS 192

  Fly   196 IAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEA--VVSSEGAVIDRPE 258
            :.|||||:||.||||||||:||||:||||:|::.||:||||:||..|..|  .....||.::|.:
Zfish   193 VGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSTSAAAKPAEGDTGAKVERAD 257

  Fly   259 GYEPPVQEAV 268
            |||||:||:|
Zfish   258 GYEPPIQESV 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS3ANP_524618.1 Ribosomal_S3Ae 21..224 CDD:425987 140/202 (69%)
rps3aNP_956353.1 Ribosomal_S3Ae 21..221 CDD:425987 140/202 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..267 14/32 (44%)

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