Protein Alignment ci and YY1

DIOPT Version :10

• Sequence 1: NP_524617.3
• Gene: ci / 43767
• FlyBaseID: FBgn0004859
• Length: 1397
• Species: Drosophila melanogaster
• Sequence 2: NP_849323.1
• Gene: YY1 / 826093
• AraportID: AT4G06634
• Length: 387
• Species: Arabidopsis thaliana
• Alignment Length: 335
• Identity: 91/335 - (27%)
• Similarity: 129/335 - (38%)
• Gaps: 81/335 - (24%)

  Fly   437 DTTDIKDEPGDFIETNCHWRSCRIEFITQDELVKHINNDHIQTNKKAFVCRWEDCTRGEKPFKAQ 501
            |..:.:.||...|...|.:..|...|.....|.||   .||. .::.:||..|.|  |:| |...
plant    65 DVPEPEPEPTTEILFLCSYDGCGKTFFDVSALRKH---SHIH-GERQYVCDQEGC--GKK-FLDS 122

  Fly   502 YMLVVHMRRHTGEKPHKCTFEGCFKAYSRLENLKTHLRSHTGEKPYTCEYPGCSKAFSNASDRAK 566
            ..|..|...||||:.:.||:|||.||:|...||::|:::|:.|..:.|.|.||.|.:::......
plant   123 SKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKN 187

  Fly   567 HQNRTH-------------------------------SNEKPYICKAPGCTKRYTDPSSLRKHVK 600
            |....|                               |:::||.|...||.|.|.....|:.|:|
plant   188 HVAAYHEKNGGGETPKYTPPAEKVLRTVKTPATVCGPSSDRPYACPYEGCEKAYIHEYKLKLHLK 252

  Fly   601 TVH-------GAEFYANKKHKGLPLNDANS----------RLQQNNSR---HNLQEH---NIDSS 642
            ..|       .|:.....||.|   ||.|.          |...:|.:   |..|..   |:.:.
plant   253 REHPGHLQEENADTPTLNKHNG---NDRNEIDDGSDQDVYRKHASNGKGQTHKQQSRAKPNMRTP 314

  Fly   643 PCSEDSHLGKMLGTSSPS---IKSESDISSSNHHLVNGVRASDSLLTYSPDDLAENLNLDDGW-- 702
            |    :.:||...||||:   |..:...:......|......||..|....|     |::|||
plant   315 P----AKVGKKGSTSSPAKARIAKKPWQAKETFEEVEREEEEDSEETEEDRD-----NVEDGWRF 370

  Fly   703 ---NCDDDVD 709
               |.|||.|
plant   371 GENNEDDDDD 380

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ci	NP_524617.3	zf-H2C2_2	503..>521	CDD:463886	7/17 (41%)
		SFP1	<513..603	CDD:227516	33/120 (28%)
		C2H2 Zn finger	519..541	CDD:275368	11/21 (52%)
		zf-H2C2_2	533..560	CDD:463886	10/26 (38%)
		C2H2 Zn finger	549..572	CDD:275368	6/22 (27%)
		C2H2 Zn finger	580..601	CDD:275368	7/20 (35%)
YY1	NP_849323.1	C2H2 Zn finger	84..103	CDD:275368	6/21 (29%)
		COG5048	<92..170	CDD:227381	31/84 (37%)
		C2H2 Zn finger	110..132	CDD:275368	8/24 (33%)
		C2H2 Zn finger	140..162	CDD:275368	11/21 (52%)
		C2H2 Zn finger	170..189	CDD:275368	5/18 (28%)
		SFP1	<196..274	CDD:227516	15/77 (19%)
		C2H2 Zn finger	232..252	CDD:275368	7/19 (37%)