Sequence 1: | NP_524617.3 | Gene: | ci / 43767 | FlyBaseID: | FBgn0004859 | Length: | 1397 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038957323.1 | Gene: | Glis3 / 680671 | RGDID: | 1565505 | Length: | 929 | Species: | Rattus norvegicus |
Alignment Length: | 1048 | Identity: | 270/1048 - (25%) |
---|---|---|---|
Similarity: | 372/1048 - (35%) | Gaps: | 382/1048 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 ALPTYFPLAYSELQFLAS-------RRAAAVAAAATVLP-----GSP------------------ 39
Fly 40 -----CINQHHPTDVSSSVTVPSIIPTGGTSDSIKTS---IQPQICNENTLLGNAGHQHNHQPQH 96
Fly 97 VHNINVTGQPHDFHPAYRIPGYMEQLYSLQRTNSASSFHDPYVNCASAFHLAGLGLGSADFLGSR 161
Fly 162 GLSS---------LGELHNAAVAAAAAGSLASTD---FHFSVDGNRR-LGSPRPPGGSIRASISR 213
Fly 214 KRALSSSPYSD--SFDINSMIRFSPNSLATIMNGSRGSSAASGSYGHISATALNPMSHVHSTRLQ 276
Fly 277 QIQAHLLRASAGLLNPMTPQQVAASGFSIGHMPTSASLRVNDVHPNLSDSHIQITTSPTVTKDVS 341
Fly 342 QVPAAAFSLKNLDDAREKKGPFKDVVPEQPSSTSGGVAQVEADSASSQLSDRCYNNVVNNITGIP 406
Fly 407 G------DVKVNSRLDEYINCGSISIPSNEYDCANADTTDIK----------------------- 442
Fly 443 -----------DEPGDFIETN----CHWRSCRIEFITQDELVKHINNDHIQTNK-KAFVCRWEDC 491
Fly 492 TRGEKPFKAQYMLVVHMRRHTGEKPHKCTFEGCFKAYSRLENLKTHLRSHTGEKPYTCEYPGCSK 556
Fly 557 AFSNASDRAKHQNRTHSNEKPYICKAPGCTKRYTDPSSLRKHVKTVHGAEFYANKK-------HK 614
Fly 615 GL--------PLNDANSR-----------------------LQQNNS----------------RH 632
Fly 633 NLQEHNIDSSPCSEDSHLGKMLGTSSPSIKSESDISSSNHHLVNG-VRASDSLL----------- 685
Fly 686 ------TYSPDDLAENLNLDDGWNCDDDVDVADLPIVLRAMVNIGNGNASASTIGGSVLARQRFR 744
Fly 745 GRLQTKGINSSTIMLC--NIPESNRTFGISELNQRITELKMEPGTDAEIKIPKLPNTTIGGYTED 807
Fly 808 PLQNQTSFRNTVSNKQGTVSGSIQGQFRRDSQNSTASTYYGSMQSRRSSQS-------------- 858
Fly 859 SQVSSIPT 866 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ci | NP_524617.3 | zf-H2C2_2 | 503..530 | CDD:290200 | 18/26 (69%) |
C2H2 Zn finger | 519..541 | CDD:275368 | 18/21 (86%) | ||
zf-H2C2_2 | 533..560 | CDD:290200 | 21/26 (81%) | ||
C2H2 Zn finger | 549..572 | CDD:275368 | 17/22 (77%) | ||
C2H2 Zn finger | 580..601 | CDD:275368 | 18/20 (90%) | ||
Glis3 | XP_038957323.1 | C2H2 Zn finger | 506..525 | CDD:275368 | 7/18 (39%) |
C2H2 Zn finger | 536..561 | CDD:275368 | 13/24 (54%) | ||
COG5048 | 539..>839 | CDD:227381 | 126/348 (36%) | ||
SFP1 | <558..652 | CDD:227516 | 75/94 (80%) | ||
C2H2 Zn finger | 569..591 | CDD:275368 | 18/21 (86%) | ||
C2H2 Zn finger | 599..621 | CDD:275368 | 17/22 (77%) | ||
C2H2 Zn finger | 629..651 | CDD:275368 | 19/21 (90%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR45718 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |