Sequence 1: | NP_524617.3 | Gene: | ci / 43767 | FlyBaseID: | FBgn0004859 | Length: | 1397 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017454273.1 | Gene: | Gli2 / 304729 | RGDID: | 1309270 | Length: | 1544 | Species: | Rattus norvegicus |
Alignment Length: | 1766 | Identity: | 483/1766 - (27%) |
---|---|---|---|
Similarity: | 663/1766 - (37%) | Gaps: | 644/1766 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 RRAAAVAAAATVLPGSPCINQHHPTDVSSSVTVPSIIPTGGTSDSIKTSIQPQICNENTLLGNAG 87
Fly 88 HQ---HNHQPQHVHNIN----VTGQP--HDF-------HPAYRIPGYMEQLYSLQRTNSASSFHD 136
Fly 137 PYVNCASAFHL-------------AGLGLGSAD----FLGSRGLSSLGE--------LHNAAVAA 176
Fly 177 A----------AAGSLAST----DFHFSVDGNRRLGSPRPPGGSIRASISRKRALSSSPYSD-SF 226
Fly 227 DINSMIRFSPNSLATIMNGSRGSSAASGSYGHISATALNP-MSHVHSTRLQQIQAHLLRASAGLL 290
Fly 291 NPMTPQQVAAS----GFSIGHMPTSASLRVNDVHPNLSDSHIQITTSPTVTKDVSQVPAAAFSLK 351
Fly 352 NLDDAREKKGPFKDVVPEQPSSTSGGVAQVEADSASSQLSDRCYNNVVNNITGIPGDVKVNSRLD 416
Fly 417 EYINCGSISIPSNEY-DC-ANADTTDIKDEPGDFI-ETNCHWRSCRIEFITQDELVKHINNDHIQ 478
Fly 479 TNKKAFVCRWEDCTRGEKPFKAQYMLVVHMRRHTGEKPHKCTFEGCFKAYSRLENLKTHLRSHTG 543
Fly 544 EKPYTCEYPGCSKAFSNASDRAKHQNRTHSNEKPYICKAPGCTKRYTDPSSLRKHVKTVHGAEFY 608
Fly 609 ANKKHKGLPLNDANSR---LQQNNSRHNLQEHNIDSSPCSEDSHLGKMLGTSSPSIKSESDISSS 670
Fly 671 NH------HLVNGVRASDSLLTYSPDDLAENLNLDDGWNCDDDVDVADLPIVLRAMVNIGNGNAS 729
Fly 730 ASTIGGSVLARQRFRGRL-----QTKGINSSTIMLCNIPESNRTFGISELNQRIT------ELKM 783
Fly 784 E-----------PGTDAEIKIPKLPNTTIGGYTEDPLQNQTSFRNT--------VSNKQ----GT 825
Fly 826 VSGSIQGQFRRDSQNSTASTYYGSMQSRRSS---------QSSQVSSIPTMRPNPSCNSTASFYD 881
Fly 882 PISPGCSRRSSQMS----NGANCNSFT-------------STSG-----LPVLNKESNKSLNACI 924
Fly 925 NKPNIGVQGVGIYNSSLPPPPSSHLIATNLKRLQRKDSEYHNFTSGRF-SVPSYMHSLHIKNNKP 988
Fly 989 VGENEFDKAIASNARRQTDP-----------VPNINLDPLT------------------NISR-- 1022
Fly 1023 FSTTPHSFDINVGKTNNIASSINKDNLRKDLFTVSIKADMAMTSDQHPNERINLDEVEELILPDE 1087
Fly 1088 MLQYL-----NLVKDDTNH-------------------LEKEHQAVPVGSNVSETI-----ASNH 1123
Fly 1124 YREQSNIYYTNKQI----------------LTPP----SNV------------------------ 1144
Fly 1145 --DIQPN------------------------------TTKFTVQDKFAMT-------AVGGSFSQ 1170
Fly 1171 --RELSTLA--------------VPNE---HGHAK----------CESFHHQSQKYMNTDIGSKQ 1206
Fly 1207 QSALPSAHQRQTEKSNYN---------------------------------------QIIDSSMT 1232
Fly 1233 SLPEL-------NVDSIYP-------RNETENIFKVHGD-HDNEIQ---------------CGII 1267
Fly 1268 SQSQMSPSTNLNNDGQFSTVNMQPITTSKLFPPEPQKIVCD------------TQASNTSVMHLD 1320
Fly 1321 TYQRTLEYVQSCQNWMETNNTSTNQIQSLPGMPVNNTLFPDVSSSTHPYHGTNMVINDMTTSLTS 1385
Fly 1386 LLEENRYLQMM 1396 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ci | NP_524617.3 | zf-H2C2_2 | 503..530 | CDD:290200 | 25/26 (96%) |
C2H2 Zn finger | 519..541 | CDD:275368 | 20/21 (95%) | ||
zf-H2C2_2 | 533..560 | CDD:290200 | 22/26 (85%) | ||
C2H2 Zn finger | 549..572 | CDD:275368 | 19/22 (86%) | ||
C2H2 Zn finger | 580..601 | CDD:275368 | 19/20 (95%) | ||
Gli2 | XP_017454273.1 | zf-H2C2_2 | 471..498 | CDD:290200 | 25/26 (96%) |
C2H2 Zn finger | 487..509 | CDD:275368 | 20/21 (95%) | ||
zf-H2C2_2 | 501..528 | CDD:290200 | 22/26 (85%) | ||
C2H2 Zn finger | 517..540 | CDD:275368 | 19/22 (86%) | ||
C2H2 Zn finger | 548..569 | CDD:275368 | 19/20 (95%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166351316 | |
Domainoid | 1 | 1.000 | 111 | 1.000 | Domainoid score | I6104 |
eggNOG | 1 | 0.900 | - | - | E33208_3BFAM | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 444 | 1.000 | Inparanoid score | I1590 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003548 | |
OrthoInspector | 1 | 1.000 | - | - | otm44549 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104319 | |
Panther | 1 | 1.100 | - | - | O | PTHR45718 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X2040 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.750 |