DRSC/TRiP Functional Genomics Resources

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Protein Alignment ci and znf-782

DIOPT Version :10

Sequence 1:NP_524617.3 Gene:ci / 43767 FlyBaseID:FBgn0004859 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_500033.1 Gene:znf-782 / 190310 WormBaseID:WBGene00021931 Length:662 Species:Caenorhabditis elegans


Alignment Length:762 Identity:157/762 - (20%)
Similarity:246/762 - (32%) Gaps:278/762 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 DSHIQITTSPTVTKDVSQVPAAAFSLKNLDDAREKKGPFKDVVPEQPSSTSGGVAQVE-ADSASS 388
            |.|...||:.|:..|:..          .|...|:...::|.:.|:.......:.::| :|||||
 Worm     4 DYHQPTTTNTTLPDDIHM----------KDPEEEEFEEYEDELLEEEEEFDEELEELENSDSASS 58

  Fly   389 QLSDRCYNNVVNNITGIP-GDVKVNSRLDEYINCGS-----ISIPSNEYDCANADTTDIKDEPGD 447
            .:|           .|.| |....|.      :.||     :..||.....:.:.|         
 Worm    59 LVS-----------AGSPHGSSSSNG------SHGSSPPLQVQSPSQGSGSSGSPT--------- 97

  Fly   448 FIETNCHWRSCRIEFITQDELVKHINNDHIQTNKKAFVCRWEDCTRGEKPFKAQYMLVVHMRRHT 512
                            .|.| .:||                  ||...|.|....:|..|.|.||
 Worm    98 ----------------GQPE-KRHI------------------CTVCGKGFSYFSILESHKRSHT 127

  Fly   513 GEKPHKCTFEGCFKAYSRLENLKTHLRSHTGEKPYTCEYPGCSKAFSNASDRAKHQNRTHSNEKP 577
            ||||:.|.|  |.|.:::...|:.|.|:||||:||.|.|  |.|.|:....:..|:...|...:.
 Worm   128 GEKPYNCHF--CQKTFAQKATLQVHERTHTGERPYKCRY--CEKTFAQYGTKTVHEKSAHLGIRN 188

  Fly   578 YICKAPGCTKRYTDPSSLRKHVKTVHG-----AEF----YANKKHKGLPLNDANSRLQQNNSRH- 632
            |.|  |.|.|..:.||:|..|.|| ||     .:|    :|.|.:..|.:...:   :||..:| 
 Worm   189 YKC--PKCDKLLSSPSALYTHKKT-HGDKTFRCDFCPKTFALKNYLKLHVKQVH---EQNERKHV 247

  Fly   633 ----------------------------------------NLQEHN------------------I 639
                                                    |||.|.                  |
 Worm   248 CVYCNKGFAYAGSLQVHVRTHTGERPYVCKFCPKAFASQGNLQSHERTHTGERPYSCQFCQRTFI 312

  Fly   640 DSSPCS--EDSHLGKMLGTSSPSIKSES---DI-----SSSNHHLVNGVRASDSLLTYSPDDLAE 694
            ..|..:  |.:||     |...|:..:|   ||     |.::|.:|.....:.....|   ..|.
 Worm   313 QKSQLTAHESTHL-----TQKHSVNPDSTTADILPVAGSVTDHQMVGNYECTFCNKKY---PYAS 369

  Fly   695 NLNL-------DDGWNCDDDVDVADLPIVLRAMVNIGNGNASASTIGGSVLARQRFRGRLQT--- 749
            :|.:       ...::||.    ...|...:..:||......|            |:.||:|   
 Worm   370 SLYIHMRKHTEKSAYSCDG----CGKPYSQKISLNIHQDQCEA------------FKNRLKTTDS 418

  Fly   750 ------KGINSSTIMLCNIP------ESNRTFGISELNQRITE-LKMEPGTDAEIKIPKLPN--- 798
                  .|...|.:....:.      |.::.....:|:|:..: ...:..:|.|:||..|||   
 Worm   419 QFSHNCDGCGKSFVQRIALQIHVDSCEPHKNLARLKLSQQQNQNQNSDSESDTEMKICPLPNPPL 483

  Fly   799 ----------TTIGGYTEDPLQNQTSFRNTVSNKQGTVSGSIQGQFRRDSQNSTASTYYGSMQSR 853
                      ..:..|.:.|..|..              |||.|     :.:.|..|....:.|.
 Worm   484 TLAPTHQQIPPPVNIYAQQPPPNPL--------------GSILG-----NTSLTPQTLNFGLPSL 529

  Fly   854 RSSQSSQVSSIPTMRPNPSCNSTASFYDPISPGCSRRSSQMSNGANCNSFTSTSGLPVLNKESNK 918
            .|:..|            |.|:.|.| .|:         ::.|.|:....|::....|....|..
 Worm   530 SSASFS------------SLNAHAPF-TPV---------ELPNSADFGPLTASKPHAVPFHPSEM 572

  Fly   919 SLNACINKP-NIGVQGVGIYNSSL----------PPPPSSHLIATNL 954
            .|:|....| :..:.|:|..::|:          ..|..::|:..||
 Worm   573 CLSAFRKVPESSSISGLGSLSTSILSTQLLLQLQHTPDFNYLLNQNL 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ciNP_524617.3 zf-H2C2_2 503..>521 CDD:463886 10/17 (59%)
SFP1 <513..603 CDD:227516 35/89 (39%)
C2H2 Zn finger 519..541 CDD:275368 7/21 (33%)
zf-H2C2_2 533..560 CDD:463886 14/26 (54%)
C2H2 Zn finger 549..572 CDD:275368 6/22 (27%)
C2H2 Zn finger 580..601 CDD:275368 8/20 (40%)
znf-782NP_500033.1 C2H2 Zn finger 106..126 CDD:275368 7/19 (37%)
zf-H2C2_2 119..143 CDD:463886 13/25 (52%)
C2H2 Zn finger 134..154 CDD:275368 7/21 (33%)
zf-H2C2_2 147..171 CDD:463886 14/25 (56%)
C2H2 Zn finger 162..180 CDD:275368 6/19 (32%)
COG5048 <187..404 CDD:227381 45/234 (19%)
C2H2 Zn finger 191..211 CDD:275370 10/22 (45%)
C2H2 Zn finger 218..239 CDD:275368 4/20 (20%)
C2H2 Zn finger 248..268 CDD:275368 0/19 (0%)
C2H2 Zn finger 276..296 CDD:275368 4/19 (21%)
C2H2 Zn finger 304..324 CDD:275368 3/19 (16%)
C2H2 Zn finger 386..403 CDD:275368 5/20 (25%)
C2H2 Zn finger 424..441 CDD:275368 2/16 (13%)
akirin 477..>520 CDD:425410 11/61 (18%)

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