Sequence 1: | NP_524617.3 | Gene: | ci / 43767 | FlyBaseID: | FBgn0004859 | Length: | 1397 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001178839.1 | Gene: | Gli1 / 140589 | RGDID: | 621673 | Length: | 1109 | Species: | Rattus norvegicus |
Alignment Length: | 1423 | Identity: | 377/1423 - (26%) |
---|---|---|---|
Similarity: | 528/1423 - (37%) | Gaps: | 534/1423 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 158 LGSRGLSSLGELHNAAVAAAAAGSLASTDFHFSVDGNRRLGSPRPPGGSIRASISRKRALSSSPY 222
Fly 223 SD-SFDINSMIRFSPNSLATIMNGSRGSSAASGSYGHISATALNP-------MSHVHSTRLQQIQ 279
Fly 280 AHLLRASAGLLNPMTPQQVAASGFSIGHMPTSASLRVNDVHPNLSDSHIQITTSPTVTKDVSQVP 344
Fly 345 AAAFSLKNLDDAREKKGPFKDVVPEQPSSTSGGVAQVEADSASSQLSDRCYNNVVNNITGIPGDV 409
Fly 410 KVNSRLDEYINCGSISIPSNEYDCANADTTDIKDEPGDFIETNCHWRSCRIEFITQDELVKHINN 474
Fly 475 DHIQTNKKAFVCRWEDCTRGEKPFKAQYMLVVHMRRHTGEKPHKCTFEGCFKAYSRLENLKTHLR 539
Fly 540 SHTGEKPYTCEYPGCSKAFSNASDRAKHQNRTHSNEKPYICKAPGCTKRYTDPSSLRKHVKTVHG 604
Fly 605 AEFYANKKHKG---LPLNDANSRLQQNNSRHNLQEHNIDSSPCSEDSHLGKMLGT---SSPSIKS 663
Fly 664 ESDISSSNHHLVNGVRASDSLLTYSPDDLAENLNLDDGWNCDDDVDVADLPIVLRAMVNIGNGNA 728
Fly 729 SASTIGGSVLARQRFRGRLQTKGINSSTIMLCNIPESNRTFGISEL----NQRITEL-KMEPGTD 788
Fly 789 AEIKIPKLPNTTIGGYTEDPLQNQTSFRNTVSNKQG-TVSGSIQGQFRRDSQNSTASTYYGSMQS 852
Fly 853 RRSSQSSQVSSIPTMRPNPSCNSTASFYDPISPGCSRRSSQMSNGANCNSFTSTSGLPVLNKESN 917
Fly 918 KSLNACINKPNIGVQGVGIYNSSLPPPPSSHLIATNLKRL-------QRKDSEYHNFTSGRFSVP 975
Fly 976 SYMHSLHIKNNKPVGENEFDKAIASNARRQTDPVPNINLDPLTNISRFST-----TPHSFDINVG 1035
Fly 1036 KTNNIASSINKD-NLRKDLFTVSIKADMAMTSDQHPN--ERINLD--------EVEELILPDEML 1089
Fly 1090 QYLNLVKDDT------------NHLEKEHQAVPVGSNVSETIASNHYREQSNIYYTNKQILTP-- 1140
Fly 1141 ----PSNVDIQPNTTKFTVQDKFAMTAVGGSFSQRELSTLAVPNEHGHAKCESFHHQSQKYMNTD 1201
Fly 1202 ----IGSKQQSALPSAHQRQTEK--------SNYNQI-----IDS-----------SMTSLPELN 1238
Fly 1239 VDSIYPRNETENIFKVHGDHDNEIQCGII-------------------------------SQSQM 1272
Fly 1273 SP-----------------STNLNNDGQFS---------TVNM-------QPITTSKLFP----- 1299
Fly 1300 ----------------------------PEPQKIVCDTQASNTSVMHLDTYQRTLEYVQSCQNWM 1336
Fly 1337 ETNNTSTNQIQSLPGMPVNNTLFPDVSSSTHPYHG-TNMVINDMTTSLTSLLEENRYL 1393 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ci | NP_524617.3 | zf-H2C2_2 | 503..530 | CDD:290200 | 24/26 (92%) |
C2H2 Zn finger | 519..541 | CDD:275368 | 19/21 (90%) | ||
zf-H2C2_2 | 533..560 | CDD:290200 | 23/26 (88%) | ||
C2H2 Zn finger | 549..572 | CDD:275368 | 20/22 (91%) | ||
C2H2 Zn finger | 580..601 | CDD:275368 | 19/20 (95%) | ||
Gli1 | NP_001178839.1 | COG5236 | <196..>433 | CDD:227561 | 144/274 (53%) |
FOXP-CC | 237..>265 | CDD:292777 | 13/27 (48%) | ||
zf-H2C2_2 | 287..314 | CDD:290200 | 24/26 (92%) | ||
C2H2 Zn finger | 303..325 | CDD:275368 | 19/21 (90%) | ||
zf-H2C2_2 | 317..344 | CDD:290200 | 23/26 (88%) | ||
C2H2 Zn finger | 333..356 | CDD:275368 | 20/22 (91%) | ||
C2H2 Zn finger | 364..385 | CDD:275368 | 19/20 (95%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 59 | 1.000 | Domainoid score | I10387 |
eggNOG | 1 | 0.900 | - | - | E33208_3BFAM | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm44549 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104319 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR45718 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
8 | 7.860 |