DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexB and Plxnd1

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:NP_080652.2 Gene:Plxnd1 / 67784 MGIID:2154244 Length:1925 Species:Mus musculus


Alignment Length:2143 Identity:632/2143 - (29%)
Similarity:989/2143 - (46%) Gaps:436/2143 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 IESVRDSQSKNYFTHMSFDFMHNVLFAGATNKILKLNE-NLRVLAEAVTGPLHDSPQCHAGGCPE 138
            :|..|...|.....:.:.|.....::..|.|::.:|:. ||.:.|||..||:.|||.|||...|:
Mouse    49 LEIQRRFPSPTPTNNFALDGTAGTVYLAAVNRLYQLSSANLSLEAEATVGPVPDSPLCHAPQLPQ 113

  Fly   139 ---DIETSLVNNFNKILVVSYAHDGILIACGSIRQGACEI----------YSLPRFPATPQFFAV 190
               :....|.:|:||||.:. ...|:::|||||.||.|::          .|.|  ||.|.  |.
Mouse   114 ASCEHPRRLTDNYNKILQLD-PGQGLVVACGSIYQGLCQLRRRGNISALAVSFP--PAAPT--AE 173

  Fly   191 P---------LAANDENASTYAFVGPARYAWKEEDILYVGTTFTNVG-----------DYR-HDV 234
            |         :|||..||||...|.|.........:| ||.|:|..|           |:| .:.
Mouse   174 PVTVFPSMLNVAANHPNASTVGLVLPPTSGTGGSRLL-VGATYTGFGSAFFPRNRSLEDHRFENT 237

  Fly   235 PAISSRRLD-----------DLNYAEFSIQQSIINIDVKYRDHFLVDYIYGF--------NSSEY 280
            |.|:.|.||           |||.::    .:|:.|....::...:.::..|        ::..|
Mouse   238 PEIAIRSLDARGDLAKLFTFDLNPSD----DNILKIKQGAKEQHKLGFVRAFLHPAVPPHSAQPY 298

  Fly   281 AYFIIVQKKSHLADEAGYV-TRLARICITDPN---------YDSYTEITVQCTATENNVDYNIVR 335
            || :.:..::...|:.... :.|||||:  |.         .:||.::.:||..           
Mouse   299 AY-LALNSEARAGDKDSQARSLLARICL--PRGAGGDAKKLTESYIQLGLQCAG----------- 349

  Fly   336 DAKVTPASHKLAQKMGIKKDD--HVLVTVFSPSRE----ISNQPE-------SKSAMCIYSIKDI 387
                           |..:.|  ..||:|| |:||    :..:|:       :.:|:|.:...|:
Mouse   350 ---------------GAGRGDLYSRLVSVF-PAREQFFAVFERPQGAPGARNAPAALCAFRFDDV 398

  Fly   388 EDMFIENIHLCFNGTTKDRNLGYISGTINDGRCPIVGSLGNIY--------NFCSVGLKISGVSP 444
            :.........||.....|  :..:..::..|..|...|..||.        ....:...::.:.|
Mouse   399 QAAIRAARTACFVEPAPD--VVAVLDSVVQGTGPACESKRNIQLQPEQLDCGAAHLQHPLTILQP 461

  Fly   445 ITAHALFHFDNVSVTSVTATSTTDQQHSLAFLGTNMGVIKKVLLSGQSPGEYEEIVVDAGNRILP 509
            :.|..:|....::..:|.:.:    .::..||||..|.:.|:.|:.........::..|....:.
Mouse   462 LRASPVFRAPGLTAVAVASAN----NYTAVFLGTATGRLLKISLNESMQVVSRRVLTVAYGEPVH 522

  Fly   510 NTMMSPKKD--FLYVLSQRKITKLRIEHCSVYTNCSACLESRDPFCGWCSLEKRCTVRSTCQRDT 572
            :.|.....|  :||:::..::.::::..|.|::.|..|:.:.|.:||||:||.|||::..|...:
Mouse   523 HVMQFDPMDPGYLYLMTSHQMARVKVAACEVHSTCGDCVGAADAYCGWCTLETRCTLQQDCTNSS 587

  Fly   573 SASRWLSLGSGQQCIEFESIIPEKIPISELSHLHLIIR---TLPEPFNAKYRCVFGNSTPIDAEI 634
            ....|.|...|.......:::|.:|.:.. .:..:|::   :||.....:..|.:||.....|.:
Mouse   588 QPHFWTSASEGPSRCPAMTVLPSEIDVHR-DYTGMILQISGSLPSLSGMEMACDYGNGVRTVARV 651

  Fly   635 ----LENGLG-CATPPLDERPLIPTNTDHILVPLSVRSSETNKDFVSRNFAFFDCSH------HG 688
                .::.:. |...|..:.|..|...||:.|.:|||....|  .||.||..:|||.      |.
Mouse   652 PGPAYDHQIAYCNLLPRAQFPSFPAGQDHVTVEMSVRVKGHN--IVSANFTIYDCSRIGQVYPHT 714

  Fly   689 NCQECLQSSWGCNWCIFDNKCVHKSLQCRNIENAVSTVGHCPHLKKNRPEILLPV--------RV 745
            .|..||.:.|.|:|||..:.||....||::..|..|. ..||.:   .|..|.||        .|
Mouse   715 ACTSCLSTQWPCSWCIQLHSCVSNQSQCQDSPNPTSP-QDCPQI---LPSPLAPVPTGGSQDILV 775

  Fly   746 PIEIRLEIENLPKPKSAHAGFL-CTIHIEAAQMLLPAHVESNKIVVCEKTPYFYEINTHEYQAKV 809
            |         |.|....|...| |:..:|.:   ..|...:|.:|.|.      ::..|..|...
Mouse   776 P---------LTKATFFHGSSLECSFGLEES---FEAVWANNSLVRCN------QVVLHTTQKSQ 822

  Fly   810 VVTWNFQ------HYVDT---AIVTLYKCDVLGSHREHPDCSLCVTRDPKYKCAWCSNSCVYNET 865
            |...:.:      .::|:   ..|.:|.| .:||    ||||.|:.|:.      ..:.||:|:.
Mouse   823 VFPLSLKLKGPPDRFLDSPNPMTVVVYNC-AMGS----PDCSQCLGRED------LGHLCVWNDG 876

  Fly   866 CIADKNSISSGSKSAIENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREEDVRGKIFIGSVP 930
            |..      .|....:...||.|.|..|:|||||::||||:||.|.|||.|..||...::||||.
Mouse   877 CRL------RGPLQPLPGTCPAPEIRAIEPLSGPLDGGTLLTIRGRNLGRRLSDVAHGVWIGSVA 935

  Fly   931 CE--LENYQISVKIECRTG--ASLYEMSAPIKVANDAGFTESSVQFHFKNVLLTGLYPTIGPRSG 991
            ||  .:.|.:|.:|.|.||  |..:.....:.|:.:.   .|..||.:....:..|.|::||::|
Mouse   936 CEPLADRYTVSEEIVCATGPAAGAFSDVVTVNVSKEG---RSREQFSYVLPTVHSLEPSMGPKAG 997

  Fly   992 GTQLSLIGKFLNIGSTMRAFLDEYECHIDVTQASSSQVSCTTSEATQPEPIRSLHLVIDGANRTL 1056
            ||::::.|..||:||.::..:::.:...|:|:.::| ::||....|.|.|:              
Mouse   998 GTRITIHGSDLNVGSMLQVLVNDTDPCTDLTRTATS-ITCTVPGGTLPSPV-------------- 1047

  Fly  1057 ECQISTPSITNTNPTRSNFGSYQLRSLPRQPC----SIFNYTQDPRIMQIKPLRSFKSGGRVLTV 1117
                         |....|.|        :.|    ..|.|.|:|.|..|.|.||..||||.:||
Mouse  1048 -------------PVCVRFES--------RGCVHGNLTFWYMQNPVITAISPGRSPVSGGRTITV 1091

  Fly  1118 HGIYLNSIQKPELEVFYDNERVNKTSCVVINSNQMECPSPPVNYKFETFKKTNRKMDTELHLQNS 1182
            .|...:.:|...:.|.:...  ..|.|.|:||..:.||||..                       
Mouse  1092 AGERFHMVQNVSMAVHHIGR--EPTFCKVLNSTLITCPSPGA----------------------- 1131

  Fly  1183 SFQTETRYKNEYDRKKRRADFGDTFRLYTNAGSSANYFVNNNMDVTTFVKVHETQLNLQLSFVMD 1247
                                       .:||.:..::|:|.        :.:..:...:|   :|
Mouse  1132 ---------------------------LSNASAPVDFFING--------RAYADEAAEEL---LD 1158

  Fly  1248 NVQLVRNLNKYFHDIRSTIVYLADPKYLPFPND-GVKLYKGD--SLVIEGELLNLAADEYDVNVT 1309
            ..:..|.       .|..:.||.:|::.....: .:|.:.|:  :|||..|..:|..:.::.::.
Mouse  1159 PAEAQRG-------SRFRLDYLPNPQFSTAKREKWIKHHPGEPLTLVIHKEQDSLGLESHEYHIK 1216

  Fly  1310 IGTSQCNITSLALNQLLCIPPEQQPLPTDENGVDQSTDLPLVVVKVGRNLRFVIGYLKYDLNKPY 1374
            ||...|:|..::...:.|...|.  |.|.|.      .|| :.::|| |....|..|:...::. 
Mouse  1217 IGQVSCDIQIISDRVIHCSVNES--LGTAEG------QLP-ITIQVG-NFNQTIATLQLGGSET- 1270

  Fly  1375 VFSHALLVGILTVALLVVVFVIVLIIFRRKSTQAEREYKRIQIQMITLESNVRSECKQAFAELQT 1439
                |::|.|:..::|:::.|:.|.:|..||.:|||.:::..:||..:||.:|.|.::.||||||
Mouse  1271 ----AIVVSIVICSVLLLLSVVALFVFCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQT 1331

  Fly  1440 DMTDLTADL-ESTGIPTLDHVNYIMKVFFPGVSD------------------------HPILNS- 1478
            ||||||.:| .|.|||.|::.:::.:.|||..|.                        ||:|.. 
Mouse  1332 DMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLYEERYVLPSKTLNSQGGSPPQETHPLLGEW 1396

  Fly  1479 -------PKFREGSPQTNYDAAMVQFEQLIGNKYFLLMFIETLEAQRSSFSIRDRVNVASLIMVV 1536
                   |...||         :..|..|:.||:||::|:..|| |:..|::|||.::|||:.:.
Mouse  1397 NIPEHCRPSMEEG---------ISLFSSLLNNKHFLIVFVHALE-QQKDFAVRDRCSLASLLTIA 1451

  Fly  1537 LMNKMEYATEILKSLLLRLIDKSLASKHPQLMLRRTESVVEKMLTNYLAICMYDYLKEYAGSNLF 1601
            |..|:||.|.|:|.||:.|||.| |:|:|:||||||||||||||||:::||||..|:|..|...|
Mouse  1452 LHGKLEYYTSIMKELLVDLIDAS-AAKNPKLMLRRTESVVEKMLTNWMSICMYGCLRETVGEPFF 1515

  Fly  1602 LLFKAIKHQIEKGLVDAITNDARYSLSEERLLHEQVTHSVVILHI-LQDDLDEKVQCRVNDWDTI 1665
            ||..|||.||.||.:||||..|||:|:||.||.|.:......|:: .|....:.:..|..|.||:
Mouse  1516 LLLCAIKQQINKGSIDAITGKARYTLNEEWLLRENIEAKPRNLNVSFQGCGMDSLSVRAMDTDTL 1580

  Fly  1666 SQVKLKILDAIFKNTPFSMRPSVNEVDLEWRHGRGGHLTLQDEDLTTKTVNGWKRLNTLAHYGVK 1730
            :|||.|||:|..||.|:|..|...:|||||.........|:|.|.|:...:|.|:|||||||.:.
Mouse  1581 TQVKEKILEAFCKNVPYSQWPRAEDVDLEWFASSTQSYVLRDLDDTSVVEDGRKKLNTLAHYKIP 1645

  Fly  1731 ESAVMSLIARQNDNYHIPYSKNQNSAPYHNFYFINNSQSHIIINNDIESGLQQPRVYHLVKPNIP 1795
            |.|.:::......:..:...|:.::..|                            :|||.|.  
Mouse  1646 EGASLAMSLTDKKDSTLGRVKDLDTEKY----------------------------FHLVLPT-- 1680

  Fly  1796 DHYMNIKNSVLSGGSPAFQSHVVNNCNDRVNKTIPEVYLTRLLATKGTIQKFVDDFFSIILTVNE 1860
            |..:..|.|       ..|||        ..|.:||:||||||:||||:|||:||.|..||::.|
Mouse  1681 DELVEPKKS-------HRQSH--------RKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIRE 1730

  Fly  1861 ELPP-AVKWLFDLLDEAARRHDIADTDIVHAWKSNCLPLRFWVNFIKNPDFIFDVNKTYSVDSCL 1924
            :.|| |||:.||.|:|.|.:..|:|.|.:|.||:|.||||||||.:|||.|:||:.||..:|:||
Mouse  1731 DKPPLAVKYFFDFLEEQAEKRGISDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIEKTDHIDACL 1795

  Fly  1925 SVIAQTFMDACSTSEHRLGKDSPSNKLLFAKDIPNYRIMVKEFYRDVSRLPQISDQEMSTAMQQL 1989
            |||||.|:||||.|:.:||||||:||||:||:||.||..|:.:|:.:..:..:|:|||:..:.:.
Mouse  1796 SVIAQAFIDACSISDLQLGKDSPTNKLLYAKEIPEYRKTVQRYYKQIQDMTPLSEQEMNAHLAEE 1860

  Fly  1990 SVRQNEEFDTISALKELYIYITKYKDQIMESLETDINCRKMHLSRKLGNVAATLDG---DCTS 2049
            |.:...||:|..|:.|:|.|..:|:.|||.:||.:...|:..|..|...|.|.::.   :|.|
Mouse  1861 SRKYQNEFNTNVAMAEIYKYAKRYRPQIMAALEANPTARRTQLQHKFEQVVALMENNIYECYS 1923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 119/534 (22%)
PSI 535..586 CDD:279745 18/50 (36%)
PSI 683..730 CDD:214655 18/52 (35%)
PSI 836..877 CDD:214655 10/40 (25%)
IPT_plexin_repeat1 888..976 CDD:238585 38/91 (42%)
IPT_plexin_repeat2 977..1095 CDD:238584 26/121 (21%)
IPT_plexin_repeat3 1097..1211 CDD:238586 24/113 (21%)
Plexin_cytopl 1452..2017 CDD:285529 243/598 (41%)
Plxnd1NP_080652.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
Sema_plexin_D1 51..549 CDD:200508 121/543 (22%)
PSI 551..603 CDD:279745 18/51 (35%)
PSI 713..755 CDD:214655 15/42 (36%)
IPT_plexin_repeat1 893..981 CDD:238585 38/90 (42%)
IPT_plexin_repeat2 983..1069 CDD:238584 26/121 (21%)
IPT_plexin_repeat3 1071..1174 CDD:238586 33/172 (19%)
Plexin_cytopl 1345..1888 CDD:285529 243/598 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837187
Domainoid 1 1.000 66 1.000 Domainoid score I9944
eggNOG 1 0.900 - - E1_KOG3610
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100269
Panther 1 1.100 - - O PTHR22625
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.750

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