DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexB and plxna3

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:NP_001091959.1 Gene:plxna3 / 567422 ZFINID:ZDB-GENE-070613-1 Length:1892 Species:Danio rerio


Alignment Length:2060 Identity:680/2060 - (33%)
Similarity:1066/2060 - (51%) Gaps:298/2060 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 VRDSQSKNYFTHMSFDFMHNVLFAGATNKILKLNENLRVLAEAVTGPLHDSPQCH----AGGCPE 138
            |:|:.    .||::.......:|.||.|::.||:.||.......|||:.|:.:|:    ...|.:
Zfish    37 VKDTS----LTHLTVHRKTGEVFVGAINRVYKLSANLTETRSHQTGPVEDNAKCYPPPSVRACTQ 97

  Fly   139 DIETSLVNNFNKILVVSYAHDGILIACGSIRQGACEIYSLPRFPATPQFFAVP---------LAA 194
            .:|::  :|.||:|:|.||.:. |.|||||.||.|:...|      ...|.:.         |:.
Zfish    98 KLEST--DNVNKLLLVDYAGNR-LAACGSIWQGVCQFLRL------EDLFKLGEPHHRKEHYLSG 153

  Fly   195 NDENASTYAFV-----GPARYAWKEEDILYVGTTFTNVGDYRHDVPAISSRRL--DDLNYAEFSI 252
            ..|:......|     |..:...|....|::|.......:|   .|.:|||:|  |:.:...||:
Zfish   154 AKESDGMAGVVVGDDDGDLKKKKKGGSRLFIGAAIDGKSEY---FPTLSSRKLVADEESVNMFSL 215

  Fly   253 --QQSIINIDVKYRDH-------FLVDYIYGFNSSEYAYFIIVQKKSHLAD-----EAGYVTRLA 303
              |...::..:|....       |.:.|:|||:|..|.||:.:|..:.|..     |..:.:::.
Zfish   216 VYQDEFVSSQIKIPSDTLSQYPAFDIYYVYGFSSRTYIYFLTLQLDTQLTQVDVTGEKFFTSKIV 280

  Fly   304 RICITDPNYDSYTEITVQCTATENNVDYNIVRDAKVTPASHKLAQKMGIKKDDHVLVTVFSPSRE 368
            |:|..|..:.||.|..:.|  |::.|:|.:|:.|........|||.:|:.:|:.||..:||..::
Zfish   281 RMCSNDTEFYSYVEFPLGC--TKDGVEYRLVQAAYKHRPGKILAQALGLSEDEDVLFVIFSQGQK 343

  Fly   369 ISNQPESKSAMCIYSIKDIEDMFIENIHLCFNGTTKDRNLGYISGTINDGRCPIVGS---LGNIY 430
            ....|..::.:|::::..|.....|.|..|:.|..| .:|.::   :|. ..|.:.:   :|:  
Zfish   344 NRANPPRETVLCLFTLHQINLAMRERIKSCYRGEGK-LSLPWL---LNK-ELPCINTPKQIGD-- 401

  Fly   431 NFCSVGLK--ISGVSPITAHALFHFDNVSVTSVTATSTTDQQHSLAFLGTNMGVIKKVLLSGQSP 493
            :||.:.|.  :.|:..|....||......:.||.|.:..|  ||:.|:||..|.:||:.::|..|
Zfish   402 DFCGLVLNQPLGGLMVIEGIPLFDDRTDGMASVAAYTYGD--HSVVFVGTRSGHLKKIRVNGVPP 464

  Fly   494 GE-----YEEIVVDAGNRILPNTMMSPKKDFLYVLSQRKITKLRIEHCSVYTNCSACLESRDPFC 553
            ..     ||.:.|..|:.||.:.:.||...::|:||.:::::|.:|.||.|::|..||.|.||.|
Zfish   465 PSENALLYETVTVVEGSPILRDMVFSPDYQYIYLLSDKQVSRLPVESCSQYSSCKTCLGSGDPHC 529

  Fly   554 GWCSLEKRCTVRSTCQRDTSASRW---LSLGSG-QQCIEFESIIPEKIPISELS-HLHLIIRTLP 613
            |||.|..:|:.:..|:      :|   |...:. :||::. ::.|:.:.::.:| .|.:.:..:|
Zfish   530 GWCVLHNKCSRKEACE------KWAEPLHFSTELKQCVDI-TVTPDNMSVTSVSTQLSVKVANVP 587

  Fly   614 EPFNAKYRCVFGNSTPIDAEILENG-LGCATPPLDERPLIPTN-TDHILVPLSVRSSETNKDFVS 676
            . .:|...|||...|....|:|..| :.|.:|.|.:.|.:... .|..:|.||::|.||...|::
Zfish   588 N-LSAGVTCVFEELTESPGEVLAEGQILCMSPSLRDVPSVTQGYGDKRVVKLSLKSKETGLKFIT 651

  Fly   677 RNFAFFDCSHHGNCQECLQSSWGCNWCIFDNKCVHKSLQCRNIENAVSTVGHCPHLKKNRPEILL 741
            .:|.|::||...:|..|:.||:.||||.:.:.|.:...:|...|..||:...||.:..: .:||:
Zfish   652 TDFVFYNCSVLQSCSSCVSSSFPCNWCKYRHICTNNVAECSFQEGRVSSAEGCPQILPS-SDILV 715

  Fly   742 PVRVPIEIRLEIENLPKPKSAHAGFLCTIHIEAAQMLLPAHVESNKIVVCEKTPYFYEIN-THEY 805
            |..:...|.|...|||:|:|....:.|..:|:.....:||...::..:.|:.|.|:||.| ..:.
Zfish   716 PAGIVRPITLRARNLPQPQSGQKNYECVFNIQGKVQRIPAVRFNSSCIQCQNTSYWYEGNEMGDL 780

  Fly   806 QAKVVVTWNFQHYVD---TAIVTLYKCDVLGSHREHPDCSLCVTRDPKYKCAWC--SNSCVYNET 865
            .....:.|:....:|   :....||||:.     :...|.||:..|..::|.||  ...|:..:.
Zfish   781 PVDFSIVWDGDFPIDKPSSMRALLYKCEA-----QRDSCGLCLKADSTFECGWCLADKKCLLKQH 840

  Fly   866 C-IADKNSISSGSKSAIENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREEDVRGKIFIGSV 929
            | .|:.|.:..|.::.   .|..|||..|:||:||.||||.:||||.|||::..::. .:.:..|
Zfish   841 CPSAEHNWMHQGRRNI---RCSHPRITKIRPLTGPKEGGTRVTIEGENLGLQVREIT-HVRVAGV 901

  Fly   930 PCE--LENYQISVKIECRTGASLYEMSAP--------IKVANDAGFTESSVQFHFKNVLLTGLYP 984
            .|.  ...|..:.:|.|....||  ||:|        |...:....|:|:..:.|.....:.:.|
Zfish   902 RCNPAAAEYISAERIVCDMEESL--MSSPPGGPVELCIGDCSAEYRTQSTQTYSFVMPSFSRVRP 964

  Fly   985 TIGPRSGGTQLSLIGKFLNIGSTMRAFLDEYECHIDVTQASSSQVSCTTSEATQPEPIRSLHLVI 1049
            ..||.||||:|::.|:.|:.||.:..||.:.||..  .:.:..::.|.|..:.......|:.|.|
Zfish   965 EKGPVSGGTRLTISGRHLDAGSAVTVFLAQEECLF--VRRTVREIVCVTPPSASGSGPSSVKLFI 1027

  Fly  1050 DGANRTLECQISTPSITNTNPTRSNFGSYQLRSLPRQPCSIFNYTQDPRIMQIKPLRSFKSGGRV 1114
            |.|.             .|:.||                  :.||:||.|..|:|..|..:|...
Zfish  1028 DKAE-------------ITSDTR------------------YIYTEDPNISTIEPNWSIINGSTS 1061

  Fly  1115 LTVHGIYLNSIQKPELEVFYDNERVNKTS-CVVINSNQMECPSPPVNYKFETFKKTNRKMDTELH 1178
            |||.|..|.:||:|::...|..  |..|: |.::|.:.|.|.:|.:.|                 
Zfish  1062 LTVTGTNLLTIQEPKVRAKYGG--VETTNICSLVNDSVMTCLAPGIIY----------------- 1107

  Fly  1179 LQNSSFQTETRYKNEYDRKKRRADFGDTFRLYTNAGSSANYFVNNNMDVTTFVKVHETQLNLQLS 1243
                             .|:...:.|                            ||..    :..
Zfish  1108 -----------------TKREAPESG----------------------------VHPD----EFG 1123

  Fly  1244 FVMDNVQLVRNLNKYFHDIRSTIVYLADPKYLPFPNDGV-KLYKGDSLVIEGE-LLNLAADEYDV 1306
            |::|:|..:..||      .:...|..:|.:.|..|.|: ::..|..::::|: |:..|.....:
Zfish  1124 FILDHVSALLILN------GTPFTYYPNPTFEPLGNAGILEVKPGSPIILKGKNLIPPAPGNIRL 1182

  Fly  1307 N--VTIGTSQCNITSLALNQLLCIPPEQQPLPTDENGVDQSTDLPLVVVKVGRNLRFVIGYLKYD 1369
            |  ||||.:.|.:| ::.:||||..|:.    |.|                 :.:..::|.|:|.
Zfish  1183 NYSVTIGETPCLLT-VSESQLLCDSPDL----TGE-----------------QRVMILVGGLEYS 1225

  Fly  1370 LNKPYVFSHALL-----VGI-LTVALLVVVFVIVLIIFRRKSTQAEREYKRIQIQMITLESNVRS 1428
            ....:::|.:.|     :|| ....:|::..:.|||.::||:..|:|..||:|:||..|||.|..
Zfish  1226 PGMLHIYSDSTLTLPAIIGIGAGGGVLLIAIIAVLIAYKRKTRDADRTLKRLQLQMDNLESRVAL 1290

  Fly  1429 ECKQAFAELQTDMTDLTADLESTGIPTLDHVNYIMKVFFPGVSDHPILNSPKFREGSPQTNYDAA 1493
            |||:||||||||:.:||.|::...||.|::..|.|:|.|||:.:||:|     :|.....|.:.|
Zfish  1291 ECKEAFAELQTDIQELTNDMDGVKIPFLEYRTYTMRVMFPGIEEHPVL-----KELDSPANVEKA 1350

  Fly  1494 MVQFEQLIGNKYFLLMFIETLEAQRSSFSIRDRVNVASLIMVVLMNKMEYATEILKSLLLRLIDK 1558
            :..|.||:.||.|||.||.|||||| |||:|||.|||||:|..|..:|||||.:||.||..||:|
Zfish  1351 LRLFSQLLHNKMFLLTFIHTLEAQR-SFSMRDRGNVASLLMAALQGRMEYATVVLKQLLADLIEK 1414

  Fly  1559 SLASK-HPQLMLRRTESVVEKMLTNYLAICMYDYLKEYAGSNLFLLFKAIKHQIEKGLVDAITND 1622
            :|.:: ||:|:|||||||.||||||:....::.:|||.||..||:|:.|||.|:|||.:||||.:
Zfish  1415 NLENRNHPKLLLRRTESVAEKMLTNWFTFLLHRFLKECAGEPLFMLYCAIKQQMEKGPIDAITGE 1479

  Fly  1623 ARYSLSEERLLHEQVTHSVVILHIL--QDDLDEKVQCRVNDWDTISQVKLKILDAIFKNTPFSMR 1685
            |||||||::|:.:|:.:..:.|..:  :.:...::..:|.:.|||:|||.|:|||::|..|:|.|
Zfish  1480 ARYSLSEDKLIRQQIDYKQLTLMCIPPEGEAGTEIPVKVLNCDTITQVKDKLLDAVYKGIPYSQR 1544

  Fly  1686 PSVNEVDLEWRHGRGGHLTLQDEDLTTKTVNGWKRLNTLAHYGVKESAVMSLIARQNDNYHI--P 1748
            |..:::|||||.||...:.|||||:|||..:.||||||||||.|.:.::::|:.:|...|:|  .
Zfish  1545 PQADDMDLEWRQGRLTRIILQDEDVTTKIESDWKRLNTLAHYQVTDGSLVALVQKQVSAYNIANS 1609

  Fly  1749 YSKNQNSAPYHNFYFINNSQSHI-----IINNDIESGLQQPRVYHLVKPNIPDHYMNIKNSVLSG 1808
            ::..::.:.|.:....::|...:     :|..|.|:|   .:::||||    :|           
Zfish  1610 FTFTRSLSRYESLLRTSSSPDSLRSRAPMITPDQETG---TKLWHLVK----NH----------- 1656

  Fly  1809 GSPAFQSHVVNNCNDRVNKTIPEVYLTRLLATKGTIQKFVDDFFSIILTV---NEELPPAVKWLF 1870
                  .|......||.:|.:.|:|||||||||||:||||||.|..:.:.   ...||.|:|::|
Zfish  1657 ------EHADQREGDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETVFSTAHRGSALPLAIKYMF 1715

  Fly  1871 DLLDEAARRHDIADTDIVHAWKSNCLPLRFWVNFIKNPDFIFDVNKTYSVDSCLSVIAQTFMDAC 1935
            |.|||.|.:..|.|.|:.|.|||||||||||||.||||.|:||::|....|:||||:||||||:|
Zfish  1716 DFLDEQADKRQITDPDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSC 1780

  Fly  1936 STSEHRLGKDSPSNKLLFAKDIPNYRIMVKEFYRDVSRLPQISDQEMSTAMQQLSVRQNEEFDTI 2000
            |||||||||||||||||:|||||||:..|:.:|||:|::|.||||:|...:.:.|.....||:|:
Zfish  1781 STSEHRLGKDSPSNKLLYAKDIPNYKSWVERYYRDISKMPSISDQDMDAYLVEQSRLHGNEFNTL 1845

  Fly  2001 SALKELYIYITKYKDQIMESLETDINCRKMHLSRKLGNVAATLDG 2045
            |||.|||.||.|||::|:.:|:.|..|||..|..||......:.|
Zfish  1846 SALSELYFYINKYKEEILTALDRDGYCRKHKLRHKLEQAINLMSG 1890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 131/491 (27%)
PSI 535..586 CDD:279745 18/54 (33%)
PSI 683..730 CDD:214655 15/46 (33%)
PSI 836..877 CDD:214655 11/43 (26%)
IPT_plexin_repeat1 888..976 CDD:238585 33/97 (34%)
IPT_plexin_repeat2 977..1095 CDD:238584 27/117 (23%)
IPT_plexin_repeat3 1097..1211 CDD:238586 25/114 (22%)
Plexin_cytopl 1452..2017 CDD:285529 279/577 (48%)
plxna3NP_001091959.1 Sema 30..510 CDD:301699 133/499 (27%)
PSI 511..554 CDD:279745 18/48 (38%)
PSI 807..852 CDD:214655 12/49 (24%)
IPT_plexin_repeat1 861..955 CDD:238585 32/96 (33%)
IPT 957..1042 CDD:301692 27/117 (23%)
IPT_plexin_repeat3 1044..1144 CDD:238586 33/173 (19%)
IPT_PCSR 1156..1225 CDD:238337 20/90 (22%)
Plexin_cytopl 1315..1862 CDD:285529 279/576 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11646
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 1 1.000 - - FOG0000391
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100269
Panther 1 1.100 - - O PTHR22625
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.920

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