DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PlexB and plxnb1a

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:XP_009294948.1 Gene:plxnb1a / 561012 ZFINID:ZDB-GENE-050302-63 Length:2138 Species:Danio rerio


Alignment Length:2329 Identity:700/2329 - (30%)
Similarity:1081/2329 - (46%) Gaps:507/2329 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 CVNCIEELPAQALSPLNDIVAQFNLPSIPVQSTASSYGNRSIGNNIESVRDSQSKNYFTHMSF-- 92
            ||..::...|..|:.|..::       :.|....|||           .|.|.:.....|::.  
Zfish     5 CVFAVQCGMALILTLLQSLI-------LGVLGLHSSY-----------PRFSSNHTLLQHLALHP 51

  Fly    93 DFMHNVLFAGATNKILKLN--ENLRVLAEAVTGPLHDSPQC----HAGGCPEDIETSLVNNFNKI 151
            |.....::.||.:.:.:|.  :.||:..:..|||:.||..|    ....||   :..||:|.||:
Zfish    52 DPSVGTVYVGARDHLFQLAGLDGLRLEVDEETGPVRDSKDCLPPVTRQNCP---QAGLVSNHNKL 113

  Fly   152 LVVS-YAHDGILIACGSIRQGACE----------IYSLPRFPATPQFFAVPLAANDENASTYAFV 205
            |:|. |:..  ||.|||:.||.|:          ::|..| |...|:    :||||..|||   |
Zfish   114 LLVDPYSLQ--LITCGSVHQGTCQKRSLANVKEVLFSAER-PVDTQY----VAANDPLAST---V 168

  Fly   206 GPARYAWKEEDILYVGTTFTNVGDYRHDVPAISSRRLDDLNYAEFSIQQSIINIDVKYR----DH 266
            |.......::.:||||..:|:    .|  |.:|:|:|.  ....||.::: ..:.|..|    ||
Zfish   169 GLVVRPQDKDPVLYVGRGYTS----SH--PPVSTRQLS--TEPVFSYEET-AKLAVAGRLSEYDH 224

  Fly   267 FLVDYIYGFNSSEYAYFIIVQKKSHLADEAGYVTRLARICITDPNYDSYTEITVQCTATENNVDY 331
               :::..|....:.||:..::....|... |.|.:||:|:.|..|.||.|:.:.|.:......|
Zfish   225 ---NFVATFARRNHVYFLFYRRDLKAASRE-YRTYVARVCLDDQAYYSYVEVPLTCRSRSTGRTY 285

  Fly   332 NIVRDAKVTPASHKLAQKMGIKKDDHVLVTVFSPSREISNQPESKSAMCIYSIKDIEDMFIENIH 396
            :.::.|:|.      .::.|   ...||:.|||.....:|.|..:||:|:||:::::........
Zfish   286 SFLQGAQVG------GEESG---GSQVLMGVFSTGVSAANGPGEESALCVYSLEEVDRGIDATRD 341

  Fly   397 LCFN--GTTKDRNLGYISGTINDGRCPIVGSLGNIYNFCS--VGLKISGVSPITAHALFHFDNVS 457
            ||:.  |......:.||...:......:..:..|.|...|  ....::...|:.|.|:....:..
Zfish   342 LCYTKVGEKDGIKVAYIEYDVKSSCANLPTNTLNAYPCGSDHTPSPMASREPVEAEAVLDSPSAR 406

  Fly   458 VTSVTATSTTDQQHSLAFLGTNMGVIKKVLLSGQSPGE---YEEIVVDAGNRILPNTMMSPKKDF 519
            :|:|..  :..:.|::.|||.:.|.:.||.| |.| ||   |..:::.:|..|..:.::......
Zfish   407 LTAVAV--SVKEGHTIVFLGDSKGYLHKVFL-GNS-GEVKNYSSLLIQSGLAISSDLLLDSNHRH 467

  Fly   520 LYVLSQRKITKLRIEHCSVYTNCSACLESRDPFCGWCSLEKRCTVRSTCQRDTSASRWL-SLGSG 583
            :|:::...:.|..:..|..:|:||:||..:||:||||.|:.||.:||.|:..:....|| |....
Zfish   468 IYIMTSNSVEKRPVAECDTHTDCSSCLSVKDPYCGWCVLDGRCGMRSDCRLGSVEGHWLWSFDEQ 532

  Fly   584 QQCIEFESIIPEKIPISELSHLHLIIRTLPEPFNA-KYRCVFGNSTPIDAE--ILENG--LGCAT 643
            |||:..:|:......:.|...:.:.:..||..... :|.|.|.     |||  .|..|  :.|.|
Zfish   533 QQCLSVQSLSQYNASLGEQKRITVDVPGLPSLSEGDRYSCFFE-----DAETAALVQGTTVTCDT 592

  Fly   644 PPLDERPLIPTNTDHILVPLSVRSSETNKDFVSRNFAFFDC------SHHGNCQECLQSSWGCNW 702
            |.......:|...|.:.|.||:|.....  .....|.|:||      |....|..|:.|.|.|||
Zfish   593 PEAHRLQPLPQGNDSVSVMLSLRFGTVT--VALAGFTFYDCSVVQQLSASMPCSGCVNSRWKCNW 655

  Fly   703 CIFDNKCVHKSLQCRN------------------------------------------------- 718
            ||..:.|.|:| .|.:                                                 
Zfish   656 CIHQHVCTHRS-TCDSGAIIYNQHFTFPTSAPRTIKDSYTYTTSTPTTSITTVLPTTEAGITTEA 719

  Fly   719 ----------------------IENAVSTVGH--------------------------------- 728
                                  |.|..:|..|                                 
Zfish   720 IIMTTTPEPTIAPTTPLETTTPINNPPTTPNHATTSPTPLPTDTITEATTLSQNASQVDESIQVG 784

  Fly   729 ----------------------------------------------------------------- 728
                                                                             
Zfish   785 LLSTPTPQSNEELARHSTPEVTLPALRAGEVVTMGPLSEVLPSEVATLSYTEMNMDALLETGLPV 849

  Fly   729 --------------------------------------------------CPHLKKNRPEILLPV 743
                                                              ||.:::.:...||||
Zfish   850 SSASAPSGDGEAGPDSADFALAQDTDYQSDSDDLLLMEEESLLVSRGSQACPCVERIQGSSLLPV 914

  Fly   744 RVPIEIRLEIENLPKPKSAHAGFLCTIHIEAAQMLLPAHVESNK------IVVCEKTPYFYEINT 802
            .|..:|.|...||...:.....:.|.:.||...:::.|.||.:.      .:.|:...|.|....
Zfish   915 NVERKITLLGRNLHLYQDKEFDYQCVLVIEGRSVVVDAFVEGDDTQPSLFFITCQLHQYSYSAAV 979

  Fly   803 HEYQAKVVVTW--NFQ-HYVDTAIVTLYKCDVLGSHREHPDCSLCVTRDPKYKCAWCS---NSCV 861
            .||::.:.:..  :|| .|.:...|.||.|.|..|     |||.|.|.||:|.|.||.   :|||
Zfish   980 EEYKSMISIRRRDSFQMDYPEDLHVRLYNCSVGRS-----DCSRCHTADPQYGCVWCEGSPSSCV 1039

  Fly   862 YNETCIADKNSISSGSKSAIENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREEDVRGKIFI 926
            |..:|           ...::..||.|.|..|:||||||||||::|:.|||||.|.||::..:.:
Zfish  1040 YKSSC-----------TEHVQQTCPAPHIHTIEPLSGPVEGGTVVTVSGSNLGQRAEDIQHSVSV 1093

  Fly   927 GSVPCEL--ENYQISVKIECRTGASLYEMSAPIKV-ANDAGFTESSVQFHFKNVLLTGLYPTIGP 988
            ..|.|.:  :.|::|..|.|.|.||:.|.|..:.| ....|..:|:.:||::|.:|..:.|..||
Zfish  1094 AGVSCSVIPDRYEVSSSIVCETAASVGEQSGHVSVQVRGGGIGQSAQRFHYQNPVLLAVSPLKGP 1158

  Fly   989 RSGGTQLSLIGKFLNIG--STMRAFLDEYECHIDVTQASSSQVSCTTSEATQPEPIRSLHLVIDG 1051
            .||||.|::.|:.|..|  |.:...:....|||...|.|:.:|.|.|.                |
Zfish  1159 MSGGTSLTITGQNLLTGRSSEISILIGGVPCHILPEQFSNERVECVTG----------------G 1207

  Fly  1052 ANRTLECQISTPSITNTNPTRSNFGSYQLRSLPRQPCSIFNYTQDPRIMQIKPLRSFKSGGRVLT 1116
            :|||.|..::.           .||..: |.|..   :.::||.||.:....|.:||.||||::.
Zfish  1208 SNRTGESGVTV-----------RFGRAE-RHLKE---THYHYTPDPNVTHAAPSKSFISGGRIIR 1257

  Fly  1117 VHGIYLNSIQKPELEVFYDNERVNKTSCVVINSNQMECPSPPVNYKFETFKKTNRKMDTELHLQN 1181
            |.|.:|:.:|:|.:       ||..|            |..|.:.|    ||..:|..:.:|   
Zfish  1258 VAGQHLDVVQEPRI-------RVTLT------------PLEPHSQK----KKKKKKRRSAVH--- 1296

  Fly  1182 SSFQTETRYKNEYD--------RKKRRADFGDTFRLYTNAGSSANYFVNNNMDV---TTFVKVHE 1235
            |..:.|.|...|::        ||:.:         :|......:  ||::..:   |..|....
Zfish  1297 SLLRRERRIVPEHNCPEGSLCVRKQVQ---------FTQVEERCS--VNSSTLILCPTPEVGPEA 1350

  Fly  1236 TQLNLQLSFVMDNVQLVRNLNKYFHDIR-STIVYLADPKYLPF----PNDGVKLYKGDSLVIEGE 1295
            .:..:.:.|::|      ||:..|.::. |...|..:|...|.    |:...:...|..:.:|||
Zfish  1351 LRAAVTVHFLLD------NLHFEFEEVSGSPFSYEPNPVLHPLNQHDPSKPFRHKPGSIISVEGE 1409

  Fly  1296 LLNLAADEYDVNVTIGTSQCNITSLALNQLLCIPPEQQPLPTDENGVDQSTDLPLVVVKVGRNLR 1360
            .|:||..:.:|...|...:|.:.:|..|.|.|.||.|||........|.:..||...|::| ||.
Zfish  1410 NLDLAMSKEEVQALIADGECAVKTLTRNHLYCEPPAQQPSVAALKKRDATDTLPEFTVRMG-NLN 1473

  Fly  1361 FVIGYLKYDLNKPYVFSHALLVGILTVALLVVVFVIVLI-IFRRKSTQAEREYKRIQIQMITLES 1424
            |.:|.::||...|..|.....||:...|.:|.:.|:|:: |:||||.||.|:||::|||:..||:
Zfish  1474 FSLGRVQYDSQGPAAFPLEAQVGVGVGASIVALIVLVIVLIYRRKSKQALRDYKKVQIQLENLET 1538

  Fly  1425 NVRSECKQAFAELQTDMTDLTADLESTGIPTLDHVNYIMKVFFPGVSDHPI---LNSPKFREGSP 1486
            :||..||:.|.:|.|:|.|::.||..:|||.||:..|..::||||..:.|:   |:.|..|    
Zfish  1539 SVRDRCKKEFTDLMTEMMDVSGDLMGSGIPFLDYRKYSERIFFPGHRESPLRRDLDVPACR---- 1599

  Fly  1487 QTNYDAAMVQFEQLIGNKYFLLMFIETLEAQRSSFSIRDRVNVASLIMVVLMNKMEYATEILKSL 1551
            :...:..:||...|:.:|.||..||.|||||| :||.|||..||||:.|.|..|:||.|:|||:|
Zfish  1600 RATVEQGLVQLSNLLNSKLFLTKFIHTLEAQR-TFSPRDRAYVASLLTVALHGKLEYFTDILKTL 1663

  Fly  1552 LLRLIDKSLASKHPQLMLRRTESVVEKMLTNYLAICMYDYLKEYAGSNLFLLFKAIKHQIEKGLV 1616
            |..|::: ..:|:|:||||||||||||:|||:::||:|.:|::.||.:.::||:|||||::||.|
Zfish  1664 LSHLVEQ-YTTKNPKLMLRRTESVVEKLLTNWMSICLYTFLRDTAGESFYMLFRAIKHQVDKGPV 1727

  Fly  1617 DAITNDARYSLSEERLLHEQVTHSVVILHILQDD----LDEKVQCRVNDWDTISQVKLKILDAIF 1677
            ||:|..|:|:|::.|||.|.|.:..:.|::|.::    ..:.:..:|.|.|||:|||.|||:..:
Zfish  1728 DAVTGKAKYTLNDNRLLREDVEYRTLTLNVLVNNGGAGESQTLPTKVLDCDTITQVKEKILEQAW 1792

  Fly  1678 KNTPFSMRPSVNEVDLEWRHGRGGHLTLQDEDLTTKTVNGWKRLNTLAHYGVKESAVMSLIARQN 1742
            |:|.||.|||.:.|.||||.|..|||.|.|:|||:.....|||||||.||.|.:.|.::|::||:
Zfish  1793 KSTSFSQRPSADSVHLEWRAGMAGHLILSDQDLTSVVQGSWKRLNTLQHYKVPDGATVTLVSRQS 1857

  Fly  1743 DNYHIPYSKNQNSAPYHNFY-FINNSQSHIIINNDIESGLQQPRVYHLVKPN----IPDHYMNIK 1802
            ...|            |:.: :|...::.::.:.| |.|::|   :||||.|    :|.|..   
Zfish  1858 KQIH------------HDSHDYIPGEKTPMLEDGD-EGGVKQ---WHLVKANEEAELPKHRR--- 1903

  Fly  1803 NSVLSGGSPAFQSHVVNNCNDRVN---KTIPEVYLTRLLATKGTIQKFVDDFFSIILTVNEELPP 1864
                            .:..|:..   |.|||:||||||:.|||:||||||.|::||:.:..:|.
Zfish  1904 ----------------GSLRDKERERAKAIPEIYLTRLLSVKGTLQKFVDDLFTVILSTSRPVPL 1952

  Fly  1865 AVKWLFDLLDEAARRHDIADTDIVHAWKSNCLPLRFWVNFIKNPDFIFDVNKTYSVDSCLSVIAQ 1929
            |||:.|||||:.|.:|:|.|.:.:|.||:|.||||||:|.:|||.|||||..:.:||:.||||||
Zfish  1953 AVKYFFDLLDDQAAQHNITDPETIHIWKTNSLPLRFWINILKNPQFIFDVQASDNVDAVLSVIAQ 2017

  Fly  1930 TFMDACSTSEHRLGKDSPSNKLLFAKDIPNYRIMVKEFYRDVSRLPQISDQEMSTAMQQLSVRQN 1994
            ||||:|:.::|:||:|||.||||:|:|||.|:.||:.:|.|:.:...:|||||::::.:||...:
Zfish  2018 TFMDSCTIADHKLGRDSPINKLLYARDIPRYKQMVERYYSDIKQTISVSDQEMNSSLAELSRNYS 2082

  Fly  1995 EEFDTISALKELYIYITKYKDQIMESLETDINCRKMHLSRKLGNVAATLDGDCT 2048
            .|.:.:.||.|||.||.||.|||:.:||.|...:||.|..:|..:||.::...|
Zfish  2083 NEVNHLVALHELYKYINKYYDQIITALEEDSTAQKMQLGYRLQQIAAAVENKVT 2136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 121/477 (25%)
PSI 535..586 CDD:279745 22/51 (43%)
PSI 683..730 CDD:214655 20/271 (7%)
PSI 836..877 CDD:214655 16/43 (37%)
IPT_plexin_repeat1 888..976 CDD:238585 38/90 (42%)
IPT_plexin_repeat2 977..1095 CDD:238584 31/119 (26%)
IPT_plexin_repeat3 1097..1211 CDD:238586 29/121 (24%)
Plexin_cytopl 1452..2017 CDD:285529 260/579 (45%)
plxnb1aXP_009294948.1 Sema 37..482 CDD:301699 122/483 (25%)
PSI 484..535 CDD:279745 22/50 (44%)
PSI 643..>670 CDD:214655 13/27 (48%)
PSI 1008..>1052 CDD:279745 19/59 (32%)
IPT_plexin_repeat1 1055..1146 CDD:238585 38/90 (42%)
IPT 1147..1236 CDD:301692 31/119 (26%)
IPT 1238..1380 CDD:301692 41/184 (22%)
Plexin_cytopl 1566..2105 CDD:285529 260/579 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 77 1.000 Domainoid score I8773
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H130508
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100269
Panther 1 1.100 - - O PTHR22625
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.920

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