DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexB and plxna1b

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:NP_001103480.1 Gene:plxna1b / 558065 ZFINID:ZDB-GENE-061007-1 Length:1885 Species:Danio rerio


Alignment Length:2042 Identity:718/2042 - (35%)
Similarity:1070/2042 - (52%) Gaps:295/2042 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 THMSFDFMHNV---LFAGATNKILKLNENLRVLAEAVTGPLHDSPQCH----AGGCPEDIETSLV 145
            ||::   :||.   ::.||.|.|.||:.||..|...||||:.|:.:|:    ...||.|:..:  
Zfish    49 THLA---IHNKTGDVYVGAVNWIYKLSSNLTKLRSHVTGPVVDNEKCYPPPSVQSCPHDLSPN-- 108

  Fly   146 NNFNKILVVSYAHDGILIACGSIRQGACEIYSLPRFPATPQFFAV--PLAANDENASTYAFVGPA 208
            :|.||:|::.|..:. ||||||..||.|:...|      ...|.:  |....:...|:....|..
Zfish   109 SNVNKLLLIDYPQNR-LIACGSTSQGICQFLRL------DDLFKLGEPHHRKEHYLSSVVESGTM 166

  Fly   209 RYAWKEE---DILYVGTTFTNVGDYRHDVPAISSRRL----DDLNYAEFSIQQSIINIDVKYRDH 266
            ......|   ..|::||......:|   .|.:|||:|    :|.:...|..|...::..:|....
Zfish   167 SGVIISEGHLSKLFIGTPIDGKSEY---FPTLSSRKLMANEEDADMFSFVHQDEFVSSQLKIPSD 228

  Fly   267 -------FLVDYIYGFNSSEYAYFIIVQKKSHLA--DEAG---YVTRLARICITDPNYDSYTEIT 319
                   |.:.|||.|:|.::.|::.:|..:.|.  |.:|   :.:::.|:||.||.:.||.|..
Zfish   229 TLSKFPAFDIYYIYSFSSEQFVYYLTLQLDTQLTSPDASGEQFFTSKIVRLCIDDPRFYSYVEFP 293

  Fly   320 VQCTATENNVDYNIVRDAKVTPASHKLAQKMGIKKDDHVLVTVFSPSREISNQPESKSAMCIYSI 384
            :.|  |::.|:|.:::||.::....:||..:|:.:.:.:|.||||..::...:|..:||:|::::
Zfish   294 IGC--TKDGVEYRLIQDAYLSKPGRQLANSLGVSEQEDILFTVFSQGQKNRVKPPRESALCLFTL 356

  Fly   385 KDIEDMFIENIHLCFNGTTKDRNLGYISGTINDGR----------CPIVGSLGNI-YNFCSVGLK 438
            ..|::...|.|..|:.|               :||          .|.:.|...| .|||.....
Zfish   357 TKIKEKIKERIQSCYRG---------------EGRLSLPWLLNKELPCINSPLQIDDNFCGQDFN 406

  Fly   439 --ISGVSPITAHALFHFDNVSVTSVTATSTTDQQHSLAFLGTNMGVIKKVLLSGQSPGE----YE 497
              :.|...|....||...:..:|||.|...  :.:::.|.||..|.:||:|::..||..    ||
Zfish   407 QPLGGTKTIEGTPLFIDKDDGMTSVAAYDY--RGNTVVFAGTRNGRMKKILINSVSPSRPALLYE 469

  Fly   498 EIVVDAGNRILPNTMMSPKKDFLYVLSQRKITKLRIEHCSVYTNCSACLESRDPFCGWCSLEKRC 562
            .:.|..|:.:|.:.:.||...|:|.|:.:::|::.:|.||.|:.||.||.||||.||||.|...|
Zfish   470 SVAVSEGSPLLRDMLFSPDLQFIYTLTDKQVTRVPVE
RCSQYSTCSECLSSRDPHCGWCVLHNIC 534

  Fly   563 TVRSTCQRDTSASRWLSLGSGQQCIEFESIIPEKIPISELSHLHLII--RTLPEPFNAKYRCVFG 625
            :.|..|:|.....|:.|  ...||:|. ::.|..|.:: ::.:.|::  |.:|: .:|...|.|.
Zfish   535 SRRDRCERADEPQRFAS--RVDQCVEL-TVQPNNISVT-MAEVQLVLQARNVPD-LSAGVDCSFE 594

  Fly   626 NSTPIDAEILENGLGCATPPLDER-PLIPTNTDHILVPLSVRSSETNKDFVSRNFAFFDCSHHGN 689
            :.|..:..|..:.:.|.:|...|. |:.....|..::.|.::|.||.:.|.|.:|.|::||.|.:
Zfish   595 DYTQTEGTIHGSRIYCLSPTAKELVPITRLQRDTHVLKLYLKSRETGQKFASVDFTFYNCSIHRS 659

  Fly   690 CQECLQSSWGCNWCIFDNKCVHKSLQCRNIENAVSTVGHCPHLKKNRPEILLPVRVPIEIRLEIE 754
            |..|:..|:.|:||.:.:.|...:..|...|..|:....||.:..: .||.:||.||..|.|...
Zfish   660 CLSCVNGSFPCHWCKYRHLCTQNANDCSFQEGRVNMSEDCPQILPS-TEIYIPVGVPKPITLSAR 723

  Fly   755 NLPKPKSAHAGFLCTIHIEAAQMLLPAHVESNKIVVCEKTPYFYE-INTHEYQAKVVVTWNFQHY 818
            |||:|:|....:.|..||:.....:.|...::..:.|:||.|.|| .:..:....:.|.||....
Zfish   724 NLPQPQSGQRNYECVFHIQGETHSVTALRFNSSSIQCQKTTYNYEGSDISDLPVDLSVVWNGNFI 788

  Fly   819 VDTAI---VTLYKCDVLGSHREHPDCSLCVTRDPKYKCAWC--SNSCVYNETCIADKNSISSGSK 878
            :|...   ..||||..|   ||  .|.||:..||.::|.||  ...|...:.|...:|:....  
Zfish   789 IDNPYNIQAHLYKCYAL---RE--SCGLCLKADPSFECGWCVQDRKCSLRQECAQPENTWMHA-- 846

  Fly   879 SAIENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREEDVRGKIFIGSVPCE--LENYQISVK 941
            :|..:.|..|||..:.|.:||.:|||.:||.|.|||::.:|::..:.||.|.|:  .|.|..:.:
Zfish   847 TAGNSRCTHPRITKLSPETGPRQGGTRLTISGENLGLQFKDIQNGVRIGKVSCQPIEEEYISAEQ 911

  Fly   942 IECR----TGASLYEMSAPIKVAN---DAGFTESSVQFHFKNVLLTGLYPTIGPRSGGTQLSLIG 999
            |.||    ||..:.|....:.|.:   |.......| |.|.:...|.:.|:.||.||||::::.|
Zfish   912 IVCRLADATGYRVQEAHVEVCVRDCLQDYRAVSPKV-FTFVSPYFTRVVPSYGPISGGTRITIYG 975

  Fly  1000 KFLNIGSTMRAFLDEYECHIDVTQASSSQVSCTTSEATQPEPIRSLHLVIDGANRTLECQISTPS 1064
            ..||.||.:...:....|..:  :.|:.::.|.|     |..:.|      |         .||.
Zfish   976 SHLNAGSAVSIKIGLNTCQFE--RRSAREIVCVT-----PAGLGS------G---------GTPV 1018

  Fly  1065 ITNTNPTRSNFGSYQLRSLPRQPCSIFNYTQDPRIMQIKPLRSFKSGGRVLTVHGIYLNSIQKPE 1129
            :.:.|....           |.|...||||.||.|::|:|..|..|||..|||.|:.|.::::|:
Zfish  1019 MVDINAAEL-----------RNPEVKFNYTDDPTILKIEPDWSIASGGTPLTVTGVNLATVREPK 1072

  Fly  1130 LEVFYDN-ERVNKTSCVVINSNQMECPSPPVNYKFETFKKTNRKMDTELHLQNSSFQTETRYKNE 1193
            :...|.. ..||  :|.|:|:..|.|..|.|                                  
Zfish  1073 MRAKYGTISSVN--NCTVLNNTVMVCAVPSV---------------------------------- 1101

  Fly  1194 YDRKKRRADFGDTFRLYTNAGSSANYF-VNNNMDVTTFVKVHETQLNLQLSFVMDNVQLVRNLNK 1257
                               |||...:. |.|..|              ::.|:||:||::..:|:
Zfish  1102 -------------------AGSERGFSEVGNAPD--------------EIGFIMDHVQMLLVVNE 1133

  Fly  1258 YFHDIRSTIVYLADPKYLPFPNDGVKLYKGDSLVIEGE-LLNLAADEYDVNVT--IGTSQCNITS 1319
            .|.       :..||.:..|....::|..|..|:::|: |:..||..|.:|.|  ||..||.:| 
Zfish  1134 SFS-------FYPDPVFEAFGPAMLELKPGSPLILKGKNLIPSAAGNYRLNYTVLIGDKQCVLT- 1190

  Fly  1320 LALNQLLCIPPEQQPLPTDENGVDQSTDLPLVVVKVGRNLRFVIGYLKYDLNKPYVFSHALLV-- 1382
            ::..||||..|             ..|....|.|..| ..||..|.|:       ::|.:||.  
Zfish  1191 VSETQLLCESP-------------NLTGQHKVTVLAG-GFRFSPGTLQ-------IYSDSLLTLP 1234

  Fly  1383 GILTV----ALLVVVFVIVLIIFRRKSTQAEREYKRIQIQMITLESNVRSECKQAFAELQTDMTD 1443
            .|:.:    .||::|.:|:||.::|||..|:|..||:|:||..|||.|..|||:||||||||:.:
Zfish  1235 AIIGIGGGGGLLLLVIIIILIAYKRKSRDADRTLKRLQMQMHNLESRVALECKEAFAELQTDIHE 1299

  Fly  1444 LTADLESTGIPTLDHVNYIMKVFFPGVSDHPILNSPKFREGSPQTNYDAAMVQFEQLIGNKYFLL 1508
            ||.||:.:|||.||:..|.|:|.|||:.|||:|     :|.....|.:.|:..|.||:..|:|||
Zfish  1300 LTQDLDGSGIPFLDYRTYAMRVLFPGIEDHPVL-----KEMEVPANVEKALTLFGQLLNKKHFLL 1359

  Fly  1509 MFIETLEAQRSSFSIRDRVNVASLIMVVLMNKMEYATEILKSLLLRLIDKSLASK-HPQLMLRRT 1572
            .||.|||||| |||:|||.|||||||..|..:|||||.:||.||..||||:|.|| ||:|:||||
Zfish  1360 TFIRTLEAQR-SFSMRDRGNVASLIMSGLQGEMEYATGVLKQLLADLIDKNLESKNHPKLLLRRT 1423

  Fly  1573 ESVVEKMLTNYLAICMYDYLKEYAGSNLFLLFKAIKHQIEKGLVDAITNDARYSLSEERLLHEQV 1637
            |||.||||||:....:|.:|||.||..||:|:.|||.|:|||.:|:||.:|||||||::|:.:|:
Zfish  1424 ESVAEKMLTNWFTFLLYKFLKECAGEPLFMLYCAIKQQMEKGPIDSITGEARYSLSEDKLIRQQI 1488

  Fly  1638 THSVVILHILQDDLDEKVQCRVN--DWDTISQVKLKILDAIFKNTPFSMRPSVNEVDLEWRHGRG 1700
            .:..:.||.:..:.:...:..|.  :.||::|||.|:|||:||.||:|.||.|.::|||||.||.
Zfish  1489 DYKTLTLHCINPENENAAEVMVKCLNCDTVTQVKEKLLDAVFKGTPYSQRPKVGDMDLEWRQGRM 1553

  Fly  1701 GHLTLQDEDLTTKTVNGWKRLNTLAHYGVKESAVMSLIARQNDNYHIPYSK--NQNSAPYHNFYF 1763
            ..:.|||||:|||..|.||||||||||.|.:.::::|:.:||..|:|..|.  .::.:.|.:...
Zfish  1554 ARIILQDEDVTTKIDNDWKRLNTLAHYQVTDGSLIALVPKQNSAYNISNSSTFTKSLSRYESMLR 1618

  Fly  1764 INNSQS----HIIINNDIESGLQQPRVYHLVKPNIPDHYMNIKNSVLSGGSPAFQSHVVNNCNDR 1824
            .::..|    ..:|..|:|||   .:::||||.:  ||              ..|..|     ||
Zfish  1619 TSSPDSLRSRTPMITPDLESG---TKLWHLVKNH--DH--------------TDQREV-----DR 1659

  Fly  1825 VNKTIPEVYLTRLLATKGTIQKFVDDFFSIILTV---NEELPPAVKWLFDLLDEAARRHDIADTD 1886
            .:|.:.|:|||||||||||:||||||.|..|.:.   ...||.|:|::||.|||.|.||.|:|.|
Zfish  1660 GSKMVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADRHMISDPD 1724

  Fly  1887 IVHAWKSNCLPLRFWVNFIKNPDFIFDVNKTYSVDSCLSVIAQTFMDACSTSEHRLGKDSPSNKL 1951
            :.|.|||||||||||||.||||.|:||::|....|:||||:||||||:||||||:||||||||||
Zfish  1725 VRHTWKSNCLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHKLGKDSPSNKL 1789

  Fly  1952 LFAKDIPNYRIMVKEFYRDVSRLPQISDQEMSTAMQQLSVRQNEEFDTISALKELYIYITKYKDQ 2016
            |:|||||||:..|:.:|.|:||:..||||:||..:.:.|.....:|:::|||.|::.|||||||:
Zfish  1790 LYAKDIPNYKNWVERYYSDISRMSAISDQDMSAYLAEQSRLHLNQFNSMSALHEIFSYITKYKDE 1854

  Fly  2017 IMESLETDINCRKMHLSRKLGNVAATL 2043
            |:.:||.|...|:..|..||..|..|:
Zfish  1855 ILSALERDEQSRRQRLRAKLEQVIDTM 1881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 133/490 (27%)
PSI 535..586 CDD:279745 22/50 (44%)
PSI 683..730 CDD:214655 13/46 (28%)
PSI 836..877 CDD:214655 13/42 (31%)
IPT_plexin_repeat1 888..976 CDD:238585 33/96 (34%)
IPT_plexin_repeat2 977..1095 CDD:238584 28/117 (24%)
IPT_plexin_repeat3 1097..1211 CDD:238586 24/114 (21%)
Plexin_cytopl 1452..2017 CDD:285529 294/576 (51%)
plxna1bNP_001103480.1 Sema_plexin_A1 35..506 CDD:200532 133/490 (27%)
PSI 507..>549 CDD:279745 20/41 (49%)
PSI 653..700 CDD:279745 13/46 (28%)
PSI 802..847 CDD:214655 15/51 (29%)
IPT_plexin_repeat1 856..951 CDD:238585 32/95 (34%)
IPT_plexin_repeat2 953..1037 CDD:238584 27/116 (23%)
IPT_plexin_repeat3 1040..1139 CDD:238586 37/174 (21%)
TIG 1141..1224 CDD:280079 29/97 (30%)
Plexin_cytopl 1308..1855 CDD:285529 294/576 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11646
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 1 1.000 - - FOG0000391
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100269
Panther 1 1.100 - - O PTHR22625
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.920

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